Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2014 ATGGAAGCGAGAAACCCAGCGCGGTTTAAACTGGGGAAGCAGTCATCGCTGGCCCCAGATAGGCATAGAGAAGAATCTGAACTCCATAAAGAAGATCATAATGAAGCGGATATTAATCCGGGAGTGAGGCTGATGTATGCCGCCAATGAAGGCGATCTGGATGGTATTCGCGAGCTGTTGGATTCGGGTGTTAGTGTCAATTTTAGGGATATTGATAATCGCACGGCTCTTCACGTTGCGGCGTGTCAGGGGCTCACTGATGTCGTCGCTTTGTTGCTAGAGAAAGGGGCTGAAGTTGACCCAAAAGATCGATGGGGGAGTACGCCTCTTGCAGAtgctatatattataaaaacaaTGATGTGATCAAATTATTGGAGAAGTATGGAGCAAAGTCTGTGATGGCCCCTATGCAAGTTAACCATGCTCGTGAAGTCCCAGAATATGAAATCTATCCTAATGAGCTTGATTTTACCAACAGCATCGAGATAACTAAGGGAACTTTCTGCAGTGCATTGTGGCATGGAACAGAGGTTGCCGTAAAAAAGCTTGGGGATGATGTGATTTCTAATGAGGAGAAAGTGAAGGCATTTAGAGATGAGCTTGCATTGTTTCAGAAGATTCGCCACCCTAATGTGGTTCAGTTTCTGGGTGCCGTGACTCAAAGTAGTCCAATGATGATTGTGACAGAATATCTTCCCAAGGGAGATCTTTGTACATTCTTGAAAAGGAAAGGAGCTTTGAAACCAACAACAGCTGTGAGATTTGCCCTTGATATTGCTAGGGGTATGAGTTATTTGCATGAAAATAAGCCTTCACCAATAATTCACCGGGATCTTGAGCCCTCTAATATATTGCGGGATGATTCGGGCCACCTAAAAGTTGCAGACTTTGGGGAAAGCAAATTGCTGGCAGTTAAAGAAGACAGGCCTCTAACATGCCAACAAACTTCTTGCCGCTATGTGGCTCCAGAGGTTTTTAAACAAGAAGAGTATGACACCAAAGTGGATGTTTTCTCATTTGCTTTAATTCTGCAAGAGATGATAGAAGGCTGCCCACCATTTCAAGCAAAGCAAGAAAACGAGGTTCCTAAGGTTTATGCAGCGAAAGAGCGTCCACCTTTCAGAGCTCCAGCCAAACGTTATGCTCATGGCCTGAGAGAATTGATTGAAGAGTGCTGGAATGAGAATCCAGCAAAGAGGCCAACATTTAGGCAAATAATAACGAGGCTTGAGTCCATATACAACACTCTTTCTCATAAAAGACGCTGGAAgCAAGTATGTGTAAGTGACACTGTGGGGTTGCAATATGTACAGGTTAGGCCACTGAAATGCTTCCAGAATCTGGAAGCCATGTTAAGGAGAGATCACTCAAATCTAAACAGTCCAGGTTCATCTCGTTCTACAACCGGCGGCAGTATATGA 1422 0.4388 MEARNPARFKLGKQSSLAPDRHREESELHKEDHNEADINPGVRLMYAANEGDLDGIRELLDSGVSVNFRDIDNRTALHVAACQGLTDVVALLLEKGAEVDPKDRWGSTPLADAIYYKNNDVIKLLEKYGAKSVMAPMQVNHAREVPEYEIYPNELDFTNSIEITKGTFCSALWHGTEVAVKKLGDDVISNEEKVKAFRDELALFQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLCTFLKRKGALKPTTAVRFALDIARGMSYLHENKPSPIIHRDLEPSNILRDDSGHLKVADFGESKLLAVKEDRPLTCQQTSCRYVAPEVFKQEEYDTKVDVFSFALILQEMIEGCPPFQAKQENEVPKVYAAKERPPFRAPAKRYAHGLRELIEECWNENPAKRPTFRQIITRLESIYNTLSHKRRWKQVCVSDTVGLQYVQVRPLKCFQNLEAMLRRDHSNLNSPGSSRSTTGGSI 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2014 473 MobiDBLite consensus disorder prediction 15 35 - -
Sto13g2014 473 CDD STKc_MAP3K-like 163 410 - -
Sto13g2014 473 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 429 - -
Sto13g2014 473 MobiDBLite consensus disorder prediction 1 35 - -
Sto13g2014 473 Pfam Protein tyrosine and serine/threonine kinase 173 410 IPR001245 GO:0004672|GO:0006468
Sto13g2014 473 ProSiteProfiles Ankyrin repeat region circular profile. 72 104 - -
Sto13g2014 473 SMART ANK_2a 105 135 IPR002110 GO:0005515
Sto13g2014 473 SMART ANK_2a 39 68 IPR002110 GO:0005515
Sto13g2014 473 SMART ANK_2a 72 101 IPR002110 GO:0005515
Sto13g2014 473 Pfam Ankyrin repeats (3 copies) 44 131 IPR002110 GO:0005515
Sto13g2014 473 Gene3D Transferase(Phosphotransferase) domain 1 233 443 - -
Sto13g2014 473 SUPERFAMILY Ankyrin repeat 32 131 IPR036770 -
Sto13g2014 473 Gene3D Phosphorylase Kinase; domain 1 149 232 - -
Sto13g2014 473 PIRSF ILK 2 431 - -
Sto13g2014 473 ProSiteProfiles Ankyrin repeat profile. 39 71 IPR002110 GO:0005515
Sto13g2014 473 ProSiteProfiles Ankyrin repeat profile. 72 104 IPR002110 GO:0005515
Sto13g2014 473 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 9 429 - -
Sto13g2014 473 Gene3D - 8 147 IPR036770 -
Sto13g2014 473 SUPERFAMILY Protein kinase-like (PK-like) 156 411 IPR011009 -
Sto13g2014 473 ProSiteProfiles Protein kinase domain profile. 122 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2014 Sto-Chr13 27409321 27414664 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2014 8 429 MAP Kinase Kinase Kinase AT4G18950 69.340 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Sto13g2014 PK_Tyr_Ser-Thr 1.9e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2014 - - gmx:100790126 773.081