Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2008 ATGGGATCAACCTATTGGAAGTTAAATTCTACTTCCTGCACAATTGAAATGGTTGGAGTAACACCAGAACCACCTGTTGAATCAGACAGAAAACTTTATTGTGACTGCAGTTACGAAAGCAACACAGTCTGTCATGTTGTAAACATgacCCTCAAGCGCCTTAGCCTGCCTGGTGTTCTCCCACCTCAATTGGTCAAGCTTCCCTATCTTAGAAATATAGATTTTGCTTACAATCTCTTGAATGGTACAATTCCAAAGGAATGGGCTTCAATGAATCTAACTTCAATCTCTCTTGTTGTGAACCGCTTATCAGGAGAAATTCCCGAGTATCTTGGAAATATTACTACTCTCACTTACCTaaTGCTTGAAGCAAACCAATTTACTGGTGTCGTTCCTCCTAAGCTTGGGAATCTAATCAACTTGCAGACCTTAGTACTGTCTTCCAATCAATTGACTGGGAGCTTACCAGTGACCCTTGCTGGGTTACATAATTTACAAGACTTTAGGATAAATGATAACAATTTTACTGGAACCATACCCAATTTCATACAAAACTGGACGTTTCTCCAAAGACTGAGAATCAGTGACATAATTAGTCCTAGTCAGAGTTTTCCTTCACTGGAAAACCTGCAAAGCATGGCAACATTGGTTTTGAGGAACTGTAACCTTACCGGGAAGATACCTCCATATATCTGGACGATGACAAATTTGGAAATGTTgGATGTCAGTTTTAACAAGCTAATTGGGGAAATTCCAGACATTACGAAAGAAGCTGAAAATGTATTTATTAGCAAATCTTCATTTGGCAGAGAAGAACCTGTTCCTTGCTTAGAGAATTTCAGTTGTCAACAGTATTCAAGTTGTTTACATATAAATAGTGGTGGGCAGGATTTAAAAgtcaaagaaaataaaggtGACACCCTTTATTTTGGAGATGTATCTGTTGAAGGCGGTACAGCAACAGATTACTATAGCAACAGTGATCACTGGGGACTTTCTAGTAGTGGAGACTTCATGGATGATTTTTCTGGCCAAAACATACGTTACACTGCATCTTTGACATCTTCAAATATGTCTGAACTATATACAAATGCACGTAAATCTCCACTCTCACTTACATATTTCCATAATTGCATGGAAAATGGGAACTACACCGTAAATCTCCACTTTGCTGAAATAGAGTTTACAAATGACAATACATTTAGAAGTCTTGGGAAGCGCATATTTGATATCTATATTCAGGAACAACTAATTCAAAAGGACTttaatatagagagagagacaaTTTATGCTCAAAAACCATGGGTACTACCAATACATAATGTCAGTGTCAGTAATAATATATTGGAGATTCGATTCTATTGGGCTGGCAAAGGAACAACTAGAATTCCTGATATGGGATATTATGGTCCCCTTGTATCAGCACTGTCTGTGATTTCTGATTCCAAACCTTGCTCAGATGGTGATGGTGGAAATAAGGGTACTGTTTATAAGATCGTTGCAATTGGAGTTGCGGTCCTATGCTTAGTGCTCATTGTGGCAGGAATCATTTGGTGGAAAGGCTATTTCAGAAGAAAACTTCAAAGGAAAGATATTCAGGCTGGAACTTACAGCTTGGAACAGATGAGAGCTGCCACGAATGATTTCTGTTTTGCTAACAAAATTGGAGAAGGTGGTTTTGGTCCTGTATACAAGGGTCAATTACCTGATGGTACTGTTATAGCAGTCAAGCAACTGTCATCTATGTCACGGCAGGGAAATCGcgaatttttaaatgaaataggcCTAATATCTTGCGTGCAGCATCCCAACCTTGTCAAACTTTATGGATCTTGTGTTGAAGGGGATCAGCTGCTATTGATATATGAGTACATGGAAAATAATAACCTTGCACGTGCATTATTCGATGTATACAGTTTTGGAGTTGTAACTTTAGAAATTGTTACTGGGAAGTCCAATAACAATTATGTACCAAATGATGGAGCTGTCTGTCTTCTGGACTGGGCATGTCAATTGCAGAAAAATGGAAACTTGATGGAACTGGTTGATGAAAGGTTGGGGTCAAAGGTGAATGAAAGGGAAGCAGAAACAGTGATCAAAGTGGCTCTCTTGTGCACAAATGCATCTCCGTCACTTAGGCCGACAATGTCCGAGGTTGTAAATATGCTTGAAGGACAAGTGGCTATTCCGGATGTAATCCCGGAACCAAGTTCCTACTTTGAAGATTTGAGGTTTAAAGCCTTGAGAGACTTTGGTCAACATTGGTCAAGGCAGAGTTTGAGTGGAAGTCAGAATCAATCTTCAGGGACGACAGTTAATGCTATCAGTTTAGAATCTGGCAATACTTCCGCAGATAGCATAATGGCTGAGTCAGCATTGAAGTTTTGA 2388 0.3836 MGSTYWKLNSTSCTIEMVGVTPEPPVESDRKLYCDCSYESNTVCHVVNMTLKRLSLPGVLPPQLVKLPYLRNIDFAYNLLNGTIPKEWASMNLTSISLVVNRLSGEIPEYLGNITTLTYLMLEANQFTGVVPPKLGNLINLQTLVLSSNQLTGSLPVTLAGLHNLQDFRINDNNFTGTIPNFIQNWTFLQRLRISDIISPSQSFPSLENLQSMATLVLRNCNLTGKIPPYIWTMTNLEMLDVSFNKLIGEIPDITKEAENVFISKSSFGREEPVPCLENFSCQQYSSCLHINSGGQDLKVKENKGDTLYFGDVSVEGGTATDYYSNSDHWGLSSSGDFMDDFSGQNIRYTASLTSSNMSELYTNARKSPLSLTYFHNCMENGNYTVNLHFAEIEFTNDNTFRSLGKRIFDIYIQEQLIQKDFNIERETIYAQKPWVLPIHNVSVSNNILEIRFYWAGKGTTRIPDMGYYGPLVSALSVISDSKPCSDGDGGNKGTVYKIVAIGVAVLCLVLIVAGIIWWKGYFRRKLQRKDIQAGTYSLEQMRAATNDFCFANKIGEGGFGPVYKGQLPDGTVIAVKQLSSMSRQGNREFLNEIGLISCVQHPNLVKLYGSCVEGDQLLLIYEYMENNNLARALFDVYSFGVVTLEIVTGKSNNNYVPNDGAVCLLDWACQLQKNGNLMELVDERLGSKVNEREAETVIKVALLCTNASPSLRPTMSEVVNMLEGQVAIPDVIPEPSSYFEDLRFKALRDFGQHWSRQSLSGSQNQSSGTTVNAISLESGNTSADSIMAESALKF 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2008 795 SUPERFAMILY Protein kinase-like (PK-like) 536 753 IPR011009 -
Sto13g2008 795 Gene3D Ribonuclease Inhibitor 157 271 IPR032675 -
Sto13g2008 795 Pfam Malectin domain 288 476 IPR021720 -
Sto13g2008 795 Pfam Protein tyrosine and serine/threonine kinase 551 634 IPR001245 GO:0004672|GO:0006468
Sto13g2008 795 Pfam Leucine rich repeat 116 175 IPR001611 GO:0005515
Sto13g2008 795 Gene3D Phosphorylase Kinase; domain 1 522 619 - -
Sto13g2008 795 ProSiteProfiles Protein kinase domain profile. 549 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2008 795 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 268 635 - -
Sto13g2008 795 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 38 223 - -
Sto13g2008 795 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 636 773 - -
Sto13g2008 795 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 636 773 - -
Sto13g2008 795 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 38 223 - -
Sto13g2008 795 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 268 635 - -
Sto13g2008 795 SUPERFAMILY L domain-like 39 254 - -
Sto13g2008 795 Gene3D Ribonuclease Inhibitor 4 156 IPR032675 -
Sto13g2008 795 Gene3D - 286 483 - -
Sto13g2008 795 Gene3D Transferase(Phosphotransferase) domain 1 620 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2008 Sto-Chr13 27370444 27379877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2008 1 635 Receptor kinase-like Gene Family AT1G29750 49.860 0.0 695
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto13g2008 Malectin 2.1e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2008 - - qlo:115990047 815.839