Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2007 ATGAAGAAGGTTGTCAACTTGTCTGCGTTTTCACTTCTTGTTGTATTGACGTGTTTCCGTTTGCCGAGGATTTCTGCGGCGAAATTGCCACAGGAAGAAGTTGATGCTCTTCAAGAGATTGTTAGTACGATGGGCTCAACATATTGGAAGTTTGATGCTACTTCCTTCGAAATTGAAATGGTTGGAGTCACACCAGAACCACCTGAAGAATCAGAGAGAAAAATTGTTTGTGACTGCAGCTTTGAAAGCAACACAGTCTGTCATGTTACAAAAATGACCCTCAAGCGCCTTAGCCTGCCTGGCGTGCTCCCACCTCAGCTGGTCAAGCTTCCCTATCTTCAAGAAATAGATTTTGCTTACAATCTCTTCAATGGCACAATTCCGAAGGAATGGGCTTCAATGAATTTAACTTCAATCTCTCTTCTTGTGAACCGCTTATCAGGAGAAATTCCCGAGTATCTTGGAAATATTACTACTCTCACATACCTAATGCTTGAAGGAAACCAATTTTCTGGTGTCATTCCACCTAAGCTTGGGAATCTAATCAACTTGCAGACCTTGTCACTCTCTTCCAATCAATTGACTGGGAGCTTACCAGTGATATTTGCTGGGTTACATAATTTAACTGACTTTAGGATAAATGATAACAATTTTACTGGAACCATACCCAATTTCATACAAAACTGGAAGCTTCTCCAACGACTGAGAATCAGTGACATAATTAGTCCTAGTCAGAGTTTTCCTTTGCTGGAAAACATGCAAAGCATGACAACATTGGTTTTGAGGAACTGTAACCTTATCGGGGAGATACCTTCCTATATTTGGACGTTGACCAATTTGGCAACTTTGGATGTCAGTTTTAACAAGCTAGTTGGGGAAATTCCACCAACATTAAGTCTTAGACGTCTGAGATATATCTACCTTACAGGAAATATGCTAAGTGGAAATATACCTGATTCGATCTTGAAGAGTGGCAGTAGCATTGATCTTTCTTACAACAACTTTACTTGGCAAGGCCCTCAGCAACCTGCTTGTCAGGATGACATGTCAGAAATgaatttaaatctGAATTTGTTCCGAAGCTTTAGGAAGAAGAACAAGTTAGAAGAACTTGTTCCTTGCTCAGAGAATTTCAGTTGTCGACAGTATTCAAGTTGTTTACACATTAATAGTGGTGGAAAGGATATATCAGTAAAAGAAGATACAGGAGACAATCTTTACTTGGGGGATGGAAATGTTGAAGGTGGTACAGCAACATATTACTATAGCAACAATGATCATTGGGGGTTCAGTAGTACTGGAGACTTCATGGATGATTTTGAGGCCCAGAACATACGTTATGCAGTTTCTCTGACATCTTCAAATAtgcaagaaatatataaaacagCACGAATTTCTCCACTTTCACTCACTTATTTCCATAATTGCATGGAAAATGGAAACTACACTGTGAATCTTCACTTTGCTGAAATACAGTTTACAAATGACAATACATATAAAAGTCTTGGGAAGCgcatatttgatatatatgttCAGGAACAACTAGTTCAGAAGAATTTTAATATTGAGAGTGAGACAAACGTTGCTCAAAAACCATTGGTACTGCCAATACATAATGTCAGTGTCACAGACAATATCTTGGAGATTCGTTTCCATTGGGCTGGAAAAGGAACAACTAGAATTCCTGATATAGGAGTTTATGGTCCCCTAATATCGGCAGTGTCTGTGGTTTCTGATTCCAGACCTTGCTCAAACGGTGGAAAGAAGAGTGCAGTTTATAAGATCATTGCAATTGGAGTTGCTGCTCTATGCTTTGTTCTTCTTATGGCAGGAATCATTTGGTGGAAAGGCTGTTTCAGAGTAATACTCCGAAAGAAAGAAGATATTCAGATTGGAACTTTCAGCCTCAAACAGATGAGAGCTGCCACTAATGACTTCTCTTACGATAACAAAATTGGAGAAGGCGGTTTTGGTCCTGTATACAAGGGTCAATTACCTGATGGTACTGTTGTAGCCATCAAGCAACTATCATCCATGTCACGCCAGGGAAATCGTGAATTTCTAAATGAAATAGGCCTTATATCTTGTTTGCAACATCCTAACCTTGTGAAACTTTATGGATCTTGCATTGATGGAGATCAACTACTATTGATATATGAGTACATGGAAAATAATAACCTTGCCCGTGCCTTAGGTTATATGGCACCGGAATATGCATTATGGGGCCATTTAACATATAAGGCAGATGTTTACAGTTTTGGAGTTGTGGCCTTAGAAATTGTAACTGGGAAGTCCAATAACAATTATGTACCGAATGATGGCGCTGTCTGTCTTCTGGACTGGGCATGTCAATTGCAACAAACGAGAAACTTGATGAAACTAGTTGATGAAAGGCTGGATTCAAAGGTGAATGAAAGGGAAGCAGAAATAATGATAAAAGTAGCTCTCCTCTGCACAAATGCATCTCCATCACTTAGGCCTACAATGTCTGAGGTTGTAAATATGCTTGAAGGACAAATGGATATTCCAGATGTAGTGCCAGAACCCAATGCCTACAATGAAGATTTGAGATTTAAAGCCTTGAGAGACCTTGGTCAATTCTGGTCAAGGCAGAGTTTGGATGGAAGTCAGACTCAGACCCAATCTTCTGTGACAGTCCGTACATTCAGCTTAGAATCTGGCAACACTTCCACAGCTTACTCTACGGATCATAAGTTAAATAGAAATAGTGACGTTTCATCTTCAAAGGCAAGCCAAACACCCTGA 2766 0.3915 MKKVVNLSAFSLLVVLTCFRLPRISAAKLPQEEVDALQEIVSTMGSTYWKFDATSFEIEMVGVTPEPPEESERKIVCDCSFESNTVCHVTKMTLKRLSLPGVLPPQLVKLPYLQEIDFAYNLFNGTIPKEWASMNLTSISLLVNRLSGEIPEYLGNITTLTYLMLEGNQFSGVIPPKLGNLINLQTLSLSSNQLTGSLPVIFAGLHNLTDFRINDNNFTGTIPNFIQNWKLLQRLRISDIISPSQSFPLLENMQSMTTLVLRNCNLIGEIPSYIWTLTNLATLDVSFNKLVGEIPPTLSLRRLRYIYLTGNMLSGNIPDSILKSGSSIDLSYNNFTWQGPQQPACQDDMSEMNLNLNLFRSFRKKNKLEELVPCSENFSCRQYSSCLHINSGGKDISVKEDTGDNLYLGDGNVEGGTATYYYSNNDHWGFSSTGDFMDDFEAQNIRYAVSLTSSNMQEIYKTARISPLSLTYFHNCMENGNYTVNLHFAEIQFTNDNTYKSLGKRIFDIYVQEQLVQKNFNIESETNVAQKPLVLPIHNVSVTDNILEIRFHWAGKGTTRIPDIGVYGPLISAVSVVSDSRPCSNGGKKSAVYKIIAIGVAALCFVLLMAGIIWWKGCFRVILRKKEDIQIGTFSLKQMRAATNDFSYDNKIGEGGFGPVYKGQLPDGTVVAIKQLSSMSRQGNREFLNEIGLISCLQHPNLVKLYGSCIDGDQLLLIYEYMENNNLARALGYMAPEYALWGHLTYKADVYSFGVVALEIVTGKSNNNYVPNDGAVCLLDWACQLQQTRNLMKLVDERLDSKVNEREAEIMIKVALLCTNASPSLRPTMSEVVNMLEGQMDIPDVVPEPNAYNEDLRFKALRDLGQFWSRQSLDGSQTQTQSSVTVRTFSLESGNTSTAYSTDHKLNRNSDVSSSKASQTP 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2007 921 Pfam Protein tyrosine and serine/threonine kinase 648 731 IPR001245 GO:0004672|GO:0006468
Sto13g2007 921 Pfam Protein tyrosine and serine/threonine kinase 732 836 IPR001245 GO:0004672|GO:0006468
Sto13g2007 921 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 732 859 - -
Sto13g2007 921 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 78 731 - -
Sto13g2007 921 SUPERFAMILY Protein kinase-like (PK-like) 629 851 IPR011009 -
Sto13g2007 921 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RFK1-RELATED 78 731 - -
Sto13g2007 921 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RFK1-RELATED 732 859 - -
Sto13g2007 921 Gene3D - 384 581 - -
Sto13g2007 921 SMART LRR_typ_2 181 204 IPR003591 -
Sto13g2007 921 SMART LRR_typ_2 277 301 IPR003591 -
Sto13g2007 921 SUPERFAMILY L domain-like 85 298 - -
Sto13g2007 921 Pfam Malectin domain 386 574 IPR021720 -
Sto13g2007 921 ProSiteProfiles Protein kinase domain profile. 646 921 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2007 921 Pfam Leucine rich repeat 159 218 IPR001611 GO:0005515
Sto13g2007 921 Gene3D Transferase(Phosphotransferase) domain 1 717 845 - -
Sto13g2007 921 MobiDBLite consensus disorder prediction 894 921 - -
Sto13g2007 921 Gene3D Ribonuclease Inhibitor 31 244 IPR032675 -
Sto13g2007 921 Gene3D Phosphorylase Kinase; domain 1 620 716 - -
Sto13g2007 921 Gene3D Ribonuclease Inhibitor 245 353 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2007 Sto-Chr13 27353244 27364268 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2007 5 731 Receptor kinase-like Gene Family AT1G29750 55.159 0.0 842
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto13g2007 Malectin 1.7e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2007 - - zju:107412400 989.564