Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1997 atgtCTCATGTTTCTCCTTTCTCATGGCTGTCCAAGTTCAAGCAGATGAGGATCAATTCGGATTCAAGTGCTTCTGCAAGATTGAAGCAAAAGGGTAATACTACTAATGACCCAAagtcttcttctctttctgttGCTTCATCACAGTGTGGTTGTGAAGAGAGTCATGAGGGTAAGAAAAGTACTGAGGATGTTGTGAGAACAGAATTATACAATTTGCAGGAGGAGGATGAGGTTGTTGTTCCAAGTGAGGAGAAGCATGGGAGAAAAGAAGGGACTCtgaagttgaagaagaagaagaagaagaagaaagatacaGGTACAGATGAAGGAAGTAAAATTCTGAGAGATACTGAGATCCCATTGGAGATGGGTGATGATGAGTACAATAGAGAAAAGGAACTTGAGAAGTTAAGGAGGACTTTTGAGAGGAAAGCACAACGAGTTCTGCAAGAGAGACTCTTGAAATTAGAGAAAGAAGCAGAAAAGGCTAACAAAGATGTGATTCAACTTGAGTCATCATCACCTAGAACAATTTGTACACCAAGAACACTCTCTTTTGTTCCTTCAGTAGTTTCCAAGAACAATTCCATCATCCTTGGAGGTCTTAATGAAGGTGGCCTATTCAGTAAGAAGAACCTTCAGAAGCAGAACCTGAAGAAAAATGAGATGGTGATAATGAAGGAAAGGAAGACAACAAAGCACAGAAGCTCCAAGGTCAGAATACATTCTCCAAGGATGGCTTCCAAGGTTGAAATCTGCAGAATCAAGGCACTGGAAGACATGAAGAAGGCAAAAGTAAGGATgaagaaggaaaaggagagaATAATGATGGAGGAAAGTAGTGCAGAAGGCTTGGATAGCTTTGCTGTGGTGAAATGCTCATTCAGTCCAGAAAAAGACTTCAGGGATTCAATGGTAGAGATGATCACAGAGTTACAGCTGAATCAGCCAGAAGAGATGGAAGAGCTTCTGGCATGCTTTCTCACTTTGAATTCTGATGAGTACCATGACCTCATTGTCAAAGTATTCCGGGAGGTATGGTTTGATATGAACAAAGATGTTCTGACTATTTCCATCTAA 1083 0.3804 MSHVSPFSWLSKFKQMRINSDSSASARLKQKGNTTNDPKSSSLSVASSQCGCEESHEGKKSTEDVVRTELYNLQEEDEVVVPSEEKHGRKEGTLKLKKKKKKKKDTGTDEGSKILRDTEIPLEMGDDEYNREKELEKLRRTFERKAQRVLQERLLKLEKEAEKANKDVIQLESSSPRTICTPRTLSFVPSVVSKNNSIILGGLNEGGLFSKKNLQKQNLKKNEMVIMKERKTTKHRSSKVRIHSPRMASKVEICRIKALEDMKKAKVRMKKEKERIMMEESSAEGLDSFAVVKCSFSPEKDFRDSMVEMITELQLNQPEEMEELLACFLTLNSDEYHDLIVKVFREVWFDMNKDVLTISI 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1997 360 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 2 353 IPR038933 GO:0045892
Sto13g1997 360 PANTHER TRANSCRIPTION REPRESSOR OFP4 2 353 - -
Sto13g1997 360 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 290 351 IPR006458 -
Sto13g1997 360 MobiDBLite consensus disorder prediction 19 113 - -
Sto13g1997 360 ProSiteProfiles OVATE domain profile. 291 350 IPR006458 -
Sto13g1997 360 Coils Coil 132 174 - -
Sto13g1997 360 MobiDBLite consensus disorder prediction 19 51 - -
Sto13g1997 360 Coils Coil 255 279 - -
Sto13g1997 360 Pfam Transcriptional repressor, ovate 297 351 IPR006458 -
Sto13g1997 360 MobiDBLite consensus disorder prediction 53 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1997 Sto-Chr13 27297291 27298373 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Sto13g1997 Ovate 5.8e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1997 - - gmx:102666239 257.299