Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1991 ATGGCCGTGCCGTTGCTTTCGAAGAAGATCGTGAAGAAGCGGGTCAAGAAGTTCAAGAGGCCACAGAGCGACCGCAAGATCTCTGTTAAGGAAAACTGGCGCAGACCCAAGGGTATTGATTCCCGTGTCAGGAGGAAGTTCAAGGGATGCACTTTGATGCCAAATATTGGTTATGGTTCAGACAAGAAAACCAGACACTACCTCCCTAATGGTTTCAAGAAATTTGTTGTGAACAACGTCAAAGAGCTCGAGCTCCTCATGATGCACAACAGGACTTATTGTGCCGAGATTGCCCACAATGTTTCCACCAGGAAGAGAAAGGAGATAGTTGAGAGAGCTGCTCAACTTGATGTTGTTGTTACAAACAAAACAGCTAGACTACGCAGCCAGGAGGATGAATGA 402 0.4652 MAVPLLSKKIVKKRVKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVNNVKELELLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDVVVTNKTARLRSQEDE 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1991 133 CDD Ribosomal_L32_L32e 22 122 IPR001515 GO:0003735|GO:0005840|GO:0006412
Sto13g1991 133 Pfam Ribosomal protein L32 16 122 IPR001515 GO:0003735|GO:0005840|GO:0006412
Sto13g1991 133 SUPERFAMILY Ribosomal protein L32e 2 131 IPR036351 -
Sto13g1991 133 PANTHER 60S RIBOSOMAL PROTEIN L32-1 1 133 - -
Sto13g1991 133 SMART Ribosomal_L32e_2 15 122 IPR001515 GO:0003735|GO:0005840|GO:0006412
Sto13g1991 133 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 1 133 IPR001515 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1991 Sto-Chr13 27249413 27251449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1991 1 133 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 86.466 1.51e-85 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1991 K02912 - gmx:100803186 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g1991 13 27249413 27251449 Sto13g1991 13 27249413 27251449 ECH