Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1974 ATGGAAACGGAGCCTCTGCTTCCGTATGTCAGTCCCAGGAAGAAGAATTCTTCGCcggcgccgccgccgccgctctGCCCGCTGCCGGAGAACGACGAGGTCATTCTTCCTCTTACACCTTCGGAGCTCAAGGACCGACTTATCTTCGGCCCTTCTTCTACTTCCCCGAAGGATTCTTCCTCGTTAGTTGAGGCGTTAACTCTGTCGCTTAATTCCTCgaaaccttcttcttcttcttcgcaaAACCTAGTGGCAACGCCTCAAGATGCACAATCTTGGCTTGTGGATCCCAACTGCCCGTGGCACAAAACTAATCTCCACCGCTCCAAAACTGCCCCGGCTATGGCGGTAATCAGTGATCTTAACCACGAAACACCTGTGGGTAAGCCCCAGTTTGGTTCGCAGTCAATTGTTCGACAAGCTGTTATTCTTTTGATCCTCTATTTGTCCTTGGGGGTGGTTATTTATTGGTTCAACCGTCATAACTTTTCAGCAATCGAGACTCATCCGGTTGTGGATGCTTTGTATTTTTGTATAGTGACAATGTGTACCATAGGATATGGTGATATTACTCCCAATAGTACAGCTACGAAGCTGTTCTCTATAATGTTtgtattggtgggttttgggtttgttgaCATATTGCTCAGTGGGATGGTCAGTTATGTTCTTGATTTGCAGGAGAATCACATGCTGGAGACGGTGAAGGGTAGGGGTGAGATTGAGAAGGATGCAAgatcatatataattgatgTGAAGAAAGGGAGAATGAGGATTAGGCTGAAGGTAGCCTTAGCTTTAGGGGTTGTGGTCCTTTGTATTGGAATTGGTTTTGGTGTGATGCATTTTGTGGAAGGGCTTGGGTGGTTGgattctttttatctttctgTTATGTCTGTAACAACTGTTGGGTATGGTGACCAGGCATTCAAGACATTGCCTGGTCGCATCTTTGCTGCAATATGGTTACTTGTATCGACACTAGCAGTGGCCCGAGCATTCCTCTATTTGGCTGAGGCAAGAGTTGATAAGCGGCATAGGAGCATGGCAAAGTGGATTCTCGGTCAGGATATGACTATTTCTGAGTTTCTTGCTGCAGACATAGACAATAATGGCTTTGTGAGTAAATCAGAATATGTTATCTACAAGCTTAAGGAGATGGGAAAAGTTTCCGAGAAAGACATTTTGCAGATTATGGAGAAGTTTGATAGGCTGGATGCTGGAAATTGTGGAAAAATTACTCTTGCTGATCTCATGGAAGGTCGGCATTGA 1272 0.4159 METEPLLPYVSPRKKNSSPAPPPPLCPLPENDEVILPLTPSELKDRLIFGPSSTSPKDSSSLVEALTLSLNSSKPSSSSSQNLVATPQDAQSWLVDPNCPWHKTNLHRSKTAPAMAVISDLNHETPVGKPQFGSQSIVRQAVILLILYLSLGVVIYWFNRHNFSAIETHPVVDALYFCIVTMCTIGYGDITPNSTATKLFSIMFVLVGFGFVDILLSGMVSYVLDLQENHMLETVKGRGEIEKDARSYIIDVKKGRMRIRLKVALALGVVVLCIGIGFGVMHFVEGLGWLDSFYLSVMSVTTVGYGDQAFKTLPGRIFAAIWLLVSTLAVARAFLYLAEARVDKRHRSMAKWILGQDMTISEFLAADIDNNGFVSKSEYVIYKLKEMGKVSEKDILQIMEKFDRLDAGNCGKITLADLMEGRH 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1974 423 SUPERFAMILY Voltage-gated potassium channels 253 359 - -
Sto13g1974 423 Gene3D - 268 332 - -
Sto13g1974 423 Gene3D - 333 422 - -
Sto13g1974 423 PRINTS Two pore domain K+ channel signature 180 208 IPR003280 GO:0005267|GO:0016020|GO:0071805
Sto13g1974 423 PRINTS Two pore domain K+ channel signature 301 310 IPR003280 GO:0005267|GO:0016020|GO:0071805
Sto13g1974 423 Gene3D - 135 236 - -
Sto13g1974 423 Pfam Ion channel 143 223 IPR013099 -
Sto13g1974 423 Pfam Ion channel 269 338 IPR013099 -
Sto13g1974 423 PANTHER TWO-PORE POTASSIUM CHANNEL 3 86 418 - -
Sto13g1974 423 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 86 418 IPR003280 GO:0005267|GO:0016020|GO:0071805
Sto13g1974 423 ProSitePatterns EF-hand calcium-binding domain. 367 379 IPR018247 -
Sto13g1974 423 MobiDBLite consensus disorder prediction 15 30 - -
Sto13g1974 423 MobiDBLite consensus disorder prediction 1 32 - -
Sto13g1974 423 SUPERFAMILY Voltage-gated potassium channels 139 258 - -
Sto13g1974 423 SUPERFAMILY EF-hand 359 419 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1974 Sto-Chr13 27115846 27120547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1974 3 421 Ion Channels AT4G18160 64.545 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1974 K05389 - gmx:100804249 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g1974 13 27115846 27120547 Sto13g1974 13 27115846 27120547 ECH