Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1972 ATGTCTTCTtcgtttaataatatatttgcaGGATCACCACCACTATTGTCGCCATCGTCGGCGTTCGATCATGATGATCAGGATCTCTCTAATTACTCTTACATGACGTTCACCGAGTGTCTTCAAGGTGCAGGAGGAGGAGTAGGCATGGATGATTACACTTCACTTCTTGCTAATACTTGTAATTCTTCCTTGGGAGGCTTCTTAttatctccttcttcttcttctgcggAAGCCAATCATCAAAAGGCAGCAGAATTGGAAGGTTCTGGAGAGTGTGCCCAGAACTCATCAATCTCCTCATCCTCTTGTGAATTAGCTGAAGAACAAGATTCAGGAACCAACAATAATAAGAAAGTACAAGCCTCAcacgaggaggaggaggaggtcaaagcagcagcagcagaagaagaagaagacgtgGAAGGCTCTACTAAGAAAGGaaGCTACTATAGATGCACGACACAGAAGTGCAGAGTGAAGAAACGCGTGGAGAGGTCATACGAGGACCCAACCACTGTGATAACAACGTATGAGGGTCAACACAACCATCCAGTCCCCACATCGCTCAGAGCTGGAGGGAATGCGGCTGCGGCTGCGGCTATGTTCACATGTGCCGCGCCTCCTTCTATTTCCATGCTCCTCAATCCTCCTCTTCTCACTTCACTACTACCCTCTTCTAATTCTCCTCCTTTCTTCCTTCACAACAATTACTTCatcaacaataacaacaacactATGATCTCCTCTCCTAATCCTACTATTACTActactgctgctgctgctgctgctgcttataattataataataataatagcgttTCGTCTTCGCTTCTTCAGCATCATGATTACGGCCTCCTTCAAGACATGGTTCCTTCTATGTTTCTCAAACAAGAGCCTTGA 903 0.371 MSSSFNNIFAGSPPLLSPSSAFDHDDQDLSNYSYMTFTECLQGAGGGVGMDDYTSLLANTCNSSLGGFLLSPSSSSAEANHQKAAELEGSGECAQNSSISSSSCELAEEQDSGTNNNKKVQASHEEEEEVKAAAAEEEEDVEGSTKKGSYYRCTTQKCRVKKRVERSYEDPTTVITTYEGQHNHPVPTSLRAGGNAAAAAAMFTCAAPPSISMLLNPPLLTSLLPSSNSPPFFLHNNYFINNNNNTMISSPNPTITTTAAAAAAAYNYNNNNSVSSSLLQHHDYGLLQDMVPSMFLKQEP 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1972 300 Pfam WRKY DNA -binding domain 140 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto13g1972 300 ProSiteProfiles WRKY domain profile. 138 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto13g1972 300 PANTHER WRKY TRANSCRIPTION FACTOR 28-RELATED 148 294 - -
Sto13g1972 300 SUPERFAMILY WRKY DNA-binding domain 140 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto13g1972 300 MobiDBLite consensus disorder prediction 73 146 - -
Sto13g1972 300 SMART WRKY_cls 138 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto13g1972 300 Gene3D WRKY domain 136 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto13g1972 300 MobiDBLite consensus disorder prediction 91 119 - -
Sto13g1972 300 Coils Coil 117 137 - -
Sto13g1972 300 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 148 294 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1972 Sto-Chr13 27095521 27096742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1972 141 299 WRKY Transcription Factor Family AT1G29860 42.138 2.83e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto13g1972 WRKY 1.1e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1972 - - gmx:100787050 134.42