Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1966 ATGAGTTGGACTATAATAGTCATCATACTCACAAcaatcttcctcttcttttctgTAGTTTCAAATGCAGAAGAAATTGAAGTTGAAGCTTTGAAAGCCTTCAAAAACTCCATAACCCATGACCCAAATGGCTCACTTTCAGATTGGGTTGACACAACCCACCATTGCAACTGGTCTGGAATTGCTTGTGATTCATCTTCTTCACAGCATGTCATCTCCATCTCTCTCATTTCTCAGAAGCTCCAAGGGAGGGTTTCACCATTCTTGGGGAATCTCTCAGCTCTTCAGGTTCTTGACTTAACCTCAAATTCATTTTCTGGTTTCATTCCTCCTCAGCTCAGTCTCTGCTCTCAACTTTCTCAGCTCATACTTTTTGATAACTCTCTCTCTGGTTCTGTTCCTCCTGAGCTGGGAAACCTCAAGAATCTGCAGTATTTGGATTTGGGTAGTAACAATCTCAATGGAAGCCTCCCTGAAAGCCTTTTCAACTCCACTTCTTTGTCAGTTTTTTATTTCAACTCTAACAATCTCAATGGTAGGATCCCATCAAACATAGGAAATATGGTTAATGTCACAGAAATTGTAGGGTATAAGAATGAGTTTGTTGGGTCTATTCCTGTCTCTATAGGCAAGTTAAGGGCTTTGAAATCTCTAGATTTTAGTGAAAACCAGTTGTCTGGAGAGATACCTAGAGAGATTGGAAACCTAAGTAACTTAGAATATCTTGTCTTGTTTGAAAATTCCTTGGTGGGAAGAATCCCTTCTGAACTAGGTCAGTGTAAGAATTTGGTGAACCTTGAGTTGTACAGTAATATGTTGTCTGGAAGCATTCCTTTTGAGTTAGGAAACTTGGTTCATTTGGAGACATTAAGGTTGTATGAAAACAACCTCAGCTCCACAATTCCATCTTCCATATTCAAGCTGAAGTCACTGACCCACTTGGGACTTTCACAGAATCACTTGGAGGGAACAATCCCTTCTGAGATTGGATCTTTGAGATCACTACAAGCTCTAACCCTTCATTCAAATGTGTTTACTGGTCAGATTCCTCTATCAATAACAAACTTGACAAATCTAACATATCTTTCATTGAATCAGAATCTGCTTTCTGGTGAAATTCCTTCTAACATAGGAGAGCTTTATAACTTGAAGTTTCTAATCCTGCACAACAACTCCTTCCATGGTCCTATTCCTCCTAGCATCACCAATTGTACTAGTTTTGTGAATGTGAGTTTGTCCCATAATCAACTCGATGGGAGAATCCCCGAGGGGTTTTCGAGGATGCCGAATCTTACTTTCTTGAGTCTATCAATGAACAAATTGTCTGGTGAAATCCCAGATGATCTCTTCAACTGCTcaaatctttttattttgagTTTGGCAGTGAACAACCTTAGTGGGATTCTGAAACCAGATGTTCAAAACCTTGTTAATCTCAACATGCTTCAGCTGAATCTAAATTCATTCACAGGGCCTATTCCACCTGAGATTGGGAACTTGAATCGGCTCGTGACTCTTTCGCTTTCTGACAATAGATTTTCGGGTCACATTCCCTTGGAATTATCCAAACTCACTCTCCTTCAAGGTCTTTACTTGCATGGGAATCAATTGGAAGGCACAATACCTGATGAACTCTTTGAAATGAAACAACTTACTGAGCTTGCACTTCATGAGAACAAGCTGGTTGGTGAAATCCCAAAGGCTTTCTCAAAGCTTGGGATGCTTTCAGTATTGGATCTTCATGGGAACAAGTTTAATGGGTCAATTCCAAGAGAAATGGGTCAGCTCAGGGAGCTCTTAATGTTGGATATCTCACAGAACCACCTCACAGGACCAATTCCTGGAGAAGTCATTGCACATTTCAGAGGCATTCAGATGTATCTCAACCTCTCACGAAACCACTTCGTTGGAACGATACCGGATGAGATCGGTATGTTGGAAATGACACAAGCCATTGATGTTTCAAACAATGACCTTTCTGGTCTCATTCCTAGGGCACTTTCTGGCTGCAGAAATTTGTTCAGTCTTGATCTTTCAGGTAACAATATCTCAGGTCCTATTCCTGCAGAAGCTTTTAGTCACATGGACTTGCTTCAAAGCTTGAACCTTTCAAGGAATCATTTAGATGGTAAAATCCCCGAGATTTTTTCAAAGCTTGAGGATCTTAGTTCCTTAGATCTTTCTCAGAATAACCTGAAGGGAACTATCCCTGAGAGCTTTAACAATCTCTCTAACCTAAAGCTTCTCAACCTTTCTTTTAACCAACTTGAAGGTCAAGTACCATCAGGTGGGATATTCTCACACCTCAATGCCTCTGAATTGATGGGAAATCCTGCTCTTTGTGGAACAAAATCCCTAGGGGAATGCAGAGAAACTACTACTACTTCCTCTTCTTCTCATTCACTGTCCAAAAAGAGCATAGCTATTATTGCTGCACTAGGATCTGTTGCTATACTTTTACTTCTAGTGTTTGTGATTCTAATTCTCAACCGAAGTGCGAAATCGCATAGTTCTGAACAGATTGAAAATCCTGAGCCAAACTACACCTCAGCTTTGGCCCTTGAAAGATTTGAAAGAAAGGACTTGGAAAATGCCACTGGTTTTTTCAGTTCAGAAAACATCATTGGAGCTAGCTCTTTGAGCACTGTCTATAAGGGTCAATTGGGAGATGGAAAGATAGTGGCAATAAAGAAACTGAACTTGCAGCAATTTTCTGCAGAATCTGATAAACTTTTCAAGAGAGAAATAAGCACCTTGATTCAATTAAGGCATAGGAATCTGGTAAAGGTACTTGGGTATGCTTGGGAGAGTAGGAAAATAAAGGCTTTGGTTCTAGAGTACATGAAAAATGGGAATTTGGAGAGCATTATTCATGATGATGAAGGGATGAATCATTGTAGGTGGACATTATCTGAAAGGCTTAATGTTTTGATTTCTGTGGCAAGTGGGTTGGATTACTTGCATTGTGGTTATGATTTTCCCATTGTTCATTGTGATTTGAAGCCTTCTAATATCCTTTTGGATGGAGAATGGGAGGCACATGTGAGTGATTTTGGGACAGCAAGAATGCTTGGTATCCATTTGAAGAATGGGAGTTCTATTTCCTCATCATCAGCTTTTGAAGGCACCATTGGCTATTTAGCAccagAGCTTGCCTACATGGGGAAAGTAACAACCAAAGTTGATGTGTTCAGCTTTGGTATAATAGTAATGGAGTTTCTGACAGGAAGAAGACCAACCGGGCTTATAGAAGAAGATGGTGTGCCGGTAAGTCTGCGCGAAAAAGTGCTGAAATCAGTTGCAGATGGAACAACACAGGATATTCTTGTGGATCCATTATTGTTGACATGTCGTGATAATGTCAGTGAAGATAAGGAACATCATGAACAAGTTTTAGTGGAGCTTCTGAAGCTATCATTGGCTTGTACACTTGCTAATCCTGAGGAAAGACCTAGTATGAATGAAGTGTTGTCTGTGCTTATGATGATGAAAACTTCAAGAAAATTCCATAAGTCTCAACCatga 3525 0.3957 MSWTIIVIILTTIFLFFSVVSNAEEIEVEALKAFKNSITHDPNGSLSDWVDTTHHCNWSGIACDSSSSQHVISISLISQKLQGRVSPFLGNLSALQVLDLTSNSFSGFIPPQLSLCSQLSQLILFDNSLSGSVPPELGNLKNLQYLDLGSNNLNGSLPESLFNSTSLSVFYFNSNNLNGRIPSNIGNMVNVTEIVGYKNEFVGSIPVSIGKLRALKSLDFSENQLSGEIPREIGNLSNLEYLVLFENSLVGRIPSELGQCKNLVNLELYSNMLSGSIPFELGNLVHLETLRLYENNLSSTIPSSIFKLKSLTHLGLSQNHLEGTIPSEIGSLRSLQALTLHSNVFTGQIPLSITNLTNLTYLSLNQNLLSGEIPSNIGELYNLKFLILHNNSFHGPIPPSITNCTSFVNVSLSHNQLDGRIPEGFSRMPNLTFLSLSMNKLSGEIPDDLFNCSNLFILSLAVNNLSGILKPDVQNLVNLNMLQLNLNSFTGPIPPEIGNLNRLVTLSLSDNRFSGHIPLELSKLTLLQGLYLHGNQLEGTIPDELFEMKQLTELALHENKLVGEIPKAFSKLGMLSVLDLHGNKFNGSIPREMGQLRELLMLDISQNHLTGPIPGEVIAHFRGIQMYLNLSRNHFVGTIPDEIGMLEMTQAIDVSNNDLSGLIPRALSGCRNLFSLDLSGNNISGPIPAEAFSHMDLLQSLNLSRNHLDGKIPEIFSKLEDLSSLDLSQNNLKGTIPESFNNLSNLKLLNLSFNQLEGQVPSGGIFSHLNASELMGNPALCGTKSLGECRETTTTSSSSHSLSKKSIAIIAALGSVAILLLLVFVILILNRSAKSHSSEQIENPEPNYTSALALERFERKDLENATGFFSSENIIGASSLSTVYKGQLGDGKIVAIKKLNLQQFSAESDKLFKREISTLIQLRHRNLVKVLGYAWESRKIKALVLEYMKNGNLESIIHDDEGMNHCRWTLSERLNVLISVASGLDYLHCGYDFPIVHCDLKPSNILLDGEWEAHVSDFGTARMLGIHLKNGSSISSSSAFEGTIGYLAPELAYMGKVTTKVDVFSFGIIVMEFLTGRRPTGLIEEDGVPVSLREKVLKSVADGTTQDILVDPLLLTCRDNVSEDKEHHEQVLVELLKLSLACTLANPEERPSMNEVLSVLMMMKTSRKFHKSQP 1174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1966 1174 Pfam Protein kinase domain 870 1158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g1966 1174 ProSitePatterns Serine/Threonine protein kinases active-site signature. 995 1007 IPR008271 GO:0004672|GO:0006468
Sto13g1966 1174 SUPERFAMILY Protein kinase-like (PK-like) 847 1163 IPR011009 -
Sto13g1966 1174 SUPERFAMILY L domain-like 27 302 - -
Sto13g1966 1174 SMART LRR_sd22_2 356 379 - -
Sto13g1966 1174 SMART LRR_sd22_2 140 163 - -
Sto13g1966 1174 SMART LRR_sd22_2 719 745 - -
Sto13g1966 1174 SMART LRR_sd22_2 260 281 - -
Sto13g1966 1174 SMART LRR_sd22_2 500 521 - -
Sto13g1966 1174 SMART LRR_sd22_2 212 238 - -
Sto13g1966 1174 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 3 115 - -
Sto13g1966 1174 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 287 371 - -
Sto13g1966 1174 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 107 206 - -
Sto13g1966 1174 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 364 1164 - -
Sto13g1966 1174 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 161 293 - -
Sto13g1966 1174 SMART LRR_typ_2 670 694 IPR003591 -
Sto13g1966 1174 SMART LRR_typ_2 236 260 IPR003591 -
Sto13g1966 1174 SMART LRR_typ_2 719 742 IPR003591 -
Sto13g1966 1174 SMART LRR_typ_2 140 164 IPR003591 -
Sto13g1966 1174 SMART LRR_typ_2 695 718 IPR003591 -
Sto13g1966 1174 SMART LRR_typ_2 356 380 IPR003591 -
Sto13g1966 1174 SMART LRR_typ_2 572 596 IPR003591 -
Sto13g1966 1174 SMART LRR_typ_2 743 768 IPR003591 -
Sto13g1966 1174 SMART LRR_typ_2 92 116 IPR003591 -
Sto13g1966 1174 SMART LRR_typ_2 428 452 IPR003591 -
Sto13g1966 1174 SMART LRR_typ_2 284 308 IPR003591 -
Sto13g1966 1174 SMART LRR_typ_2 524 548 IPR003591 -
Sto13g1966 1174 SMART LRR_typ_2 212 235 IPR003591 -
Sto13g1966 1174 SMART LRR_typ_2 309 332 IPR003591 -
Sto13g1966 1174 SMART LRR_typ_2 476 500 IPR003591 -
Sto13g1966 1174 Pfam Leucine rich repeat 651 708 IPR001611 GO:0005515
Sto13g1966 1174 Pfam Leucine rich repeat 286 343 IPR001611 GO:0005515
Sto13g1966 1174 Pfam Leucine rich repeat 550 609 IPR001611 GO:0005515
Sto13g1966 1174 SUPERFAMILY L domain-like 463 799 - -
Sto13g1966 1174 Gene3D Ribonuclease Inhibitor 625 797 IPR032675 -
Sto13g1966 1174 Gene3D Ribonuclease Inhibitor 377 622 IPR032675 -
Sto13g1966 1174 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Sto13g1966 1174 Gene3D Phosphorylase Kinase; domain 1 830 947 - -
Sto13g1966 1174 SUPERFAMILY L domain-like 286 535 - -
Sto13g1966 1174 PRINTS Leucine-rich repeat signature 722 735 - -
Sto13g1966 1174 PRINTS Leucine-rich repeat signature 743 756 - -
Sto13g1966 1174 SMART serkin_6 869 1162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g1966 1174 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 364 1164 - -
Sto13g1966 1174 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 3 115 - -
Sto13g1966 1174 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 107 206 - -
Sto13g1966 1174 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 161 293 - -
Sto13g1966 1174 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 287 371 - -
Sto13g1966 1174 Gene3D Transferase(Phosphotransferase) domain 1 948 1173 - -
Sto13g1966 1174 Gene3D Ribonuclease Inhibitor 279 376 IPR032675 -
Sto13g1966 1174 Gene3D Ribonuclease Inhibitor 181 278 IPR032675 -
Sto13g1966 1174 Gene3D Ribonuclease Inhibitor 26 180 IPR032675 -
Sto13g1966 1174 ProSiteProfiles Protein kinase domain profile. 869 1163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g1966 1174 CDD STKc_IRAK 875 1161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1966 Sto-Chr13 27050312 27054272 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1966 1 1164 Receptor kinase-like Gene Family AT5G46330 53.932 0.0 1160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sto13g1966 Pkinase 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1966 K13420 - gmx:100817960 1511.12