Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1964 TTGATTGGATTGGAGGGTGATAGCATCACATATGTTGTGGATCCTAAGACCAGTGATGAATGCAAGACTACTGTGCTTCCCAAAGGACACATTTGGATAGAGGGGGATAACATATACGACTCCACTGATTCAAGAAAATTTGGTCCTGTTCCTTATGGCCTTCTTTGTGGCAAGGCGTTCTGGAAAGTATGGCCACCTAAAACCTTTGGACGCTTGGGCAAAAACTGA 228 0.443 LIGLEGDSITYVVDPKTSDECKTTVLPKGHIWIEGDNIYDSTDSRKFGPVPYGLLCGKAFWKVWPPKTFGRLGKN 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1964 75 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 1 74 - -
Sto13g1964 75 CDD S26_SPase_I 31 59 IPR019533 GO:0004252|GO:0006465
Sto13g1964 75 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 1 74 - -
Sto13g1964 75 Pfam Signal peptidase, peptidase S26 16 64 IPR019533 GO:0004252|GO:0006465
Sto13g1964 75 Gene3D Umud Fragment, subunit A 1 72 - -
Sto13g1964 75 SUPERFAMILY LexA/Signal peptidase 2 72 IPR036286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1964 Sto-Chr13 27030955 27031749 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1964 1 73 MADS-box Gene Family AT1G29960 53.425 2.62e-27 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1964 K09647 - zju:107413489 129.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g1964 13 27030955 27031749 Sto13g1964 13 27030955 27031749 ECH