Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1951 ATGTCATATTCCTGTGCAAAGAACTTCTTCCAGAGGTTCTGGGTAGATGAATTCCAAATGGGAAGTTTTGCTCATAGCAGCTTTTTGTCTAATGATCTCCTGCCCTCCCTTGGAGCCCGAATCAACCAGGAAACTAGACTTCGAAGATACATAATATCCCCTTTCAATACCTGGTATAGGGCGTGGGAGATGTTACTGATCATTCTGGTCATTTACTCAGCCTGGATTTGCCCCTTTGAGTTTGCTTTTCTGCCTTACAAGCAAGATGCATTATTTATCATCGACAACACTGTCAATGGTTTCTTTGCCATTGACATCATCCTTACATTCTTTGTTGCATATCTAGATAGCCACTCTTACCTTCTCGTTGATGATCCAAAGAAAATTGCAATAAGGTACATATCTACCTGGTTTATTTTTGACGTATGCTCAACGGCACCATTTCAGCCCATAAGCCTCCTCTTCACTGATCATAGCAGCGAGCTTGGCTTTAAACTTCTTAACATGCTTCGACTGTGGCGTCTGAGACGTGTCAGCTTTCTGTTTGCAAGACTTGAGAAAGACATCCGCTTCAATTATTTCTGGACTAGGTGCACGAAGCTCATTGCTGTGACATTGTTTGCAGTACACTGTGCCGGATGCTTTAACTATCTGATTGCAGATAGATACCCCGATCCTAAAAGAACCTGGATTGGTGCAGTGTACCCAAATTTTAAAGAACTAAGTCTCTGGGAGAGATATGTTACTTCGATGTACTGGTCCATTGTCACACTGACAACTACTGGCTACGGGGATTTACATGCTGAAAACACAAGAGAGATGCTGTTTGATATCTTTTATATGCTGTTCAACTTGGGATTAACGTCATATATCATTGGAAACATGACAAACCTTGTAGTCCACTGGACCAGCCGCACCAGAAATTTTAGAGATACAGTTAGAGCAGCTTCAGAATTCGCATCAAGAAATCATTTGCCCCATCACGTACAAGATCAAATGTTGTCACACTTATGCTTGAGATTTAAAACAGAAGGATTGAAGCAACAAGAAACATTAAATGGTCTGCCCAAGGCAATTCGTTCAAGCATTGCGTACCACCTATTTTTCCCCGTTGTGCAGAAGGTCTACCTTTTCCAAGGAGTTTCCCATGACCTTCTTTTCCAACTGGTTTCAGAAATAGAAGCTGAGTATTTCCCACCCAAGGAAGAAGTGATACTGCAAAACGAGTCTCCTACAGACCTATATGTACTGGTGTCAGGGGCGGTGGATCTTATTCGCTACATTGATGGGCATGATCAAGTTGTCGGGAAGGCAACTGGAGGAGATGTGATTGGAGAGATTGGGGTATTATACTATAGACCACAGCCTTTCACAGTTCGGACCACGGAGCTTTCTCAAATCTTAAGACTAAGCAGAACTTCGTTAATGAATGCGGTGCAAGCAAACCCAGAGGATGCACAAATCATGATGGATAATCTTTTCACGAGATTTAAGGGACCAGAAGACCTGGGCTTTGAATATCCACGCACGGATTCTGGACTGAGTTCCCATGAAATGCTAGATGGAGGAACAAGAAGAGGAAGCTCTTCTCATACATGTACAAACAATTCAAATGGAACTTCAATAATGAAGGAAGGAAGGTACAGAGATTTCACGGAGTCAGGGGAAGCTGTTCATGACACTACAAAGAAAGGGGACCCAGATATGGTTGAAATTCTGCTCGAAAGAGATGCAACTGCTAAGAATCCAAATGTCCTAGGATGGACACCAAAAGTTCCAGTAGAGCAACAAGAGGACAACACCATTTCTGGCCTCATGATGAACGATGAAAATAGGAAGAAATTAGATGCCTATAGAATGGAGTTGGTGGCTAGGAATGACCCAACCAGAAACAGAAGACATGATAGTCCCAGGTCTGTCAACTTCCCAGTAGAAGAAGCATACACAAACTTCTCTTCTAGGTCTTATAATAGAGAAATGGCAAGATGCAAAATGAAAAGAGTTACAATCCACTTGCTATGCGATTACAGTATGACCTCACAGGGACATGGAAAGTTGATAATTCTACCTGATTCATTAGAAGAGCTGCTCAAGATTGCTGGTCAAAAATTTGTAGGCTTCAAACCCACTAAAGTTGTTAGTAAAGAAAATGCAGAGATAGATGACATAAGTGTCATTCAAGATGGCGatcatctctttcttctttgcaATAATATTAACACGATTCCGCGCGAGCTTCATCAAATTGAACGAAGAAACTTACTTGTGAAGAGGAATTCACATATAAGATACAATGCCGCCGGCGTTATCTTGAAGAATGAGCGGTGGCGAAACTTGGCGCTGAGAGTTCGACTCCACATGCTCGATCCGATCATGGAGTTCGGATTTGGTGATTCGCGCTCTTCTTTGTGCTGTCAGAATCGAGTCGGAATTGGAGATCAGAGAAAATCCGAAGAGAAGTTTCGGCGGGAATTCTACTGCGCAGAAATTTGGTGA 2496 0.4207 MSYSCAKNFFQRFWVDEFQMGSFAHSSFLSNDLLPSLGARINQETRLRRYIISPFNTWYRAWEMLLIILVIYSAWICPFEFAFLPYKQDALFIIDNTVNGFFAIDIILTFFVAYLDSHSYLLVDDPKKIAIRYISTWFIFDVCSTAPFQPISLLFTDHSSELGFKLLNMLRLWRLRRVSFLFARLEKDIRFNYFWTRCTKLIAVTLFAVHCAGCFNYLIADRYPDPKRTWIGAVYPNFKELSLWERYVTSMYWSIVTLTTTGYGDLHAENTREMLFDIFYMLFNLGLTSYIIGNMTNLVVHWTSRTRNFRDTVRAASEFASRNHLPHHVQDQMLSHLCLRFKTEGLKQQETLNGLPKAIRSSIAYHLFFPVVQKVYLFQGVSHDLLFQLVSEIEAEYFPPKEEVILQNESPTDLYVLVSGAVDLIRYIDGHDQVVGKATGGDVIGEIGVLYYRPQPFTVRTTELSQILRLSRTSLMNAVQANPEDAQIMMDNLFTRFKGPEDLGFEYPRTDSGLSSHEMLDGGTRRGSSSHTCTNNSNGTSIMKEGRYRDFTESGEAVHDTTKKGDPDMVEILLERDATAKNPNVLGWTPKVPVEQQEDNTISGLMMNDENRKKLDAYRMELVARNDPTRNRRHDSPRSVNFPVEEAYTNFSSRSYNREMARCKMKRVTIHLLCDYSMTSQGHGKLIILPDSLEELLKIAGQKFVGFKPTKVVSKENAEIDDISVIQDGDHLFLLCNNINTIPRELHQIERRNLLVKRNSHIRYNAAGVILKNERWRNLALRVRLHMLDPIMEFGFGDSRSSLCCQNRVGIGDQRKSEEKFRREFYCAEIW 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1951 831 MobiDBLite consensus disorder prediction 520 542 - -
Sto13g1951 831 Pfam KHA, dimerisation domain of potassium ion channel 666 734 IPR021789 -
Sto13g1951 831 SUPERFAMILY cAMP-binding domain-like 304 496 IPR018490 -
Sto13g1951 831 CDD CAP_ED 377 490 IPR000595 -
Sto13g1951 831 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 557 739 - -
Sto13g1951 831 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 1 562 - -
Sto13g1951 831 PANTHER POTASSIUM CHANNEL AKT1 557 739 IPR045319 GO:0005249|GO:0006813
Sto13g1951 831 PANTHER POTASSIUM CHANNEL AKT1 1 562 IPR045319 GO:0005249|GO:0006813
Sto13g1951 831 Gene3D Jelly Rolls 370 501 IPR014710 -
Sto13g1951 831 Pfam Cyclic nucleotide-binding domain 397 481 IPR000595 -
Sto13g1951 831 ProSiteProfiles cAMP/cGMP binding motif profile. 377 496 IPR000595 -
Sto13g1951 831 Gene3D Helix hairpin bin 301 367 - -
Sto13g1951 831 Pfam Ion transport protein 60 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Sto13g1951 831 SMART cnmp_10 377 494 IPR000595 -
Sto13g1951 831 SUPERFAMILY Voltage-gated potassium channels 54 299 - -
Sto13g1951 831 MobiDBLite consensus disorder prediction 522 542 - -
Sto13g1951 831 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto13g1951 831 PRINTS EAG/ELK/ERG potassium channel family signature 106 115 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto13g1951 831 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto13g1951 831 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto13g1951 831 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto13g1951 831 Gene3D - 60 300 - -
Sto13g1951 831 ProSiteProfiles KHA domain profile. 667 752 IPR021789 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1951 Sto-Chr13 26923968 26928917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1951 1 737 Ion Channels AT5G46240 61.299 0.0 909
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1951 K21867 - gmx:100783528 1088.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g1951 13 26923968 26928917 Sto13g1951 13 26923968 26928917 ECH