Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1930 ATGAGGCGTAATTCCAACTTGCAGGAGCTTTGCCTTTTTCCCTCCGTCCGCCAGGACCTCCATAACCACCGCCCTATGATGGAAGAAGGTGCAGACGCAATTTCTGATGAAACCCCACACCAAAATCTCCACAAACTCACTATCTTCTACGATGGCAAGATGTGTGTTTCCGATGTCACCGACCTTCAGGAAAAGGATGAAAAAGTGAAGACCCCAAATGGATCATCGTCAGAGCCATCTTCACCAAGTACAATTCCTGCATTGTATAGTCCAAACTCTGGCCTTTCTATGAAAAGATCGCTCCAACGTTTTCTGCAGAAGAGGAAGAATCGGATCCAAGAGGCTTCTCCATATCATCATCACTAG 366 0.4645 MRRNSNLQELCLFPSVRQDLHNHRPMMEEGADAISDETPHQNLHKLTIFYDGKMCVSDVTDLQEKDEKVKTPNGSSSEPSSPSTIPALYSPNSGLSMKRSLQRFLQKRKNRIQEASPYHHH 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1930 121 Pfam Jas motif 98 118 IPR018467 -
Sto13g1930 121 MobiDBLite consensus disorder prediction 73 96 - -
Sto13g1930 121 Pfam tify domain 44 62 IPR010399 -
Sto13g1930 121 MobiDBLite consensus disorder prediction 61 96 - -
Sto13g1930 121 PANTHER - 1 120 - -
Sto13g1930 121 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 120 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1930 Sto-Chr13 26684183 26685565 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1930 1 119 Tify Gene Family AT1G30135 38.760 5.78e-17 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Sto13g1930 Jas_motif 5.7e-10 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1930 - - gmx:100781356 122.479