Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1915 ATGGGGAAGAAGCCAAGAACGCAAGCTGCTCTTTGTTTTGTGGCATTCTTCTGGTGTTGGAGTTGGACTAATTCTGCAAATGCCTTGCTTTCTCCTAAAGGAGTAAACTTTGAAGTGCAAGCTTTAATGGGGATAAAAGCTTCTCTGAGGGATCCTCATGGTGTTTTAGATAATTGGGATGCCAATGCAGTTGATCCTTGTAGCTGGACTATGGTCACCTGTTCACCTGATAATCTGGTCATTGGCCTGGGTACTCCAAGCCAAAATTTATCAGGTACTCTATCTCCAAGCATAGGCAACCTAACCAATCTTCAGATTGTGCTGCTTCAGAATAACAATATAACTGGACCTATACCTTCAGAGATGGGTAGGCTTTCCAAGCTTCACACACTTGATCTCTCCAATAACATGTTCAATGGAGAAATTCCTCCCTCTCTGGGTCTCTTGAGAAGCCTCCAGTACTTGAGGGTCAACAATAACAGTCTTTCTGGAGAATGTCCTGAGTCACTGGCTAACATGACACAACTTAGTTTTCTTGACTTGTCCTTCAACAATTTGAGTGGCCCTGCCCCCAGAATTTTAGCCAAATCATTCAACATTGTTGGAAACCCTCTTATCTGTGCTACTGGGAAAGAAACAAAATGCCATGGGATGATGACACTGATTCCTATGTCCATGAACTTGAACACTACAAATGATGCTATACCTTCCAGCAGACCAAAATCACACAAGATGGCCATTGCCTTTGGCTTGAGTCTAGGATGCCTTTGCCTCATAGTTCTTGGTTTTGGACTAGTTCTGTGGTGGAGGCACAAGCATAACCAACAGGCATTTTTTGATGTCAAAGACCGTCATCATGAAGAAGTATACCTTGGAAACCTAAAGAGGTTCCATTTCAGAGAACTCCAGGTTGCTACAAACAACTTCAGCAGCAAGAACATACTAGGTAAGGGTGGATTTGGAAATGTGTACAAAGGACTCCTCCCTGATGGAACTCTTGTAGCTGTCAAGAGGCTTAAGGATGGCAATGCCATTGGAGGAGAGATCCAATTTCAGACAGAAGTCGAAATGATCAGCCTAGCCGTGCACCGAAACCTCCTCAGACTCTATGGATTCTGCATGACACCAAATGAAAGGCTTCTGGTTTACCCTTACATGTCTAATGGCAGCGTCGCTTCGCGCCTCAAGGGTAAGCCAGTGTTAGATTGGAGCACAAGGAAGCAAATTGCTTTGGGAGCAGCAAGGGGACTACTATACCTTCATGAGCAGTGTGATCCAAAGATAATTCATAGAGATGTGAAAGCTGCAAATATATTGCTGGATGACTATTGTGAGGCAGTGGTTGGAGATTTTGGATTGGCTAAGCTTTTGGATCACCAAGACTCACATGTTACAACTGCAGTGAGAGGCACTGTGGGGCATATTGCCCCTGAGTATCTCTCCACAGGGCAATCCTCCGAGAAAACCGATGTCTTCGGATTCGGGATTCTGCTTCTGGAACTCATTACAGGCCAGAGGGCTCTTGAATTTGGAAAGGCATCTAACCAAAAAGGAGCCATGCTTGATTGGGTGAGGAAGATTCATCAGGAGAAGAAGCTAGAATTGTTTGTGGACAAGGATCTGAAGAACAACTATGACAGAATTGAGCTTGAAGAAATGGTACAAGTGGCTCTTTTGTGCACTCAATACCTTCCAGGTCATAGACCAAAAATGTCTGAAGTAGTAAGGATGCTTGAAGGGGATGGACTTGCAGAAAGATGGGAAGCATCTCAAAGAGCTGACATAAACAAGTGCAACAAACCCCATGAGTTCTCTTCATCAGATCGCTATTCTGATCTTACTGATGACTCTTCATTGCAAGCACAGGCCATGGAGCTTTCAGGTCCAAGGTGA 1893 0.4432 MGKKPRTQAALCFVAFFWCWSWTNSANALLSPKGVNFEVQALMGIKASLRDPHGVLDNWDANAVDPCSWTMVTCSPDNLVIGLGTPSQNLSGTLSPSIGNLTNLQIVLLQNNNITGPIPSEMGRLSKLHTLDLSNNMFNGEIPPSLGLLRSLQYLRVNNNSLSGECPESLANMTQLSFLDLSFNNLSGPAPRILAKSFNIVGNPLICATGKETKCHGMMTLIPMSMNLNTTNDAIPSSRPKSHKMAIAFGLSLGCLCLIVLGFGLVLWWRHKHNQQAFFDVKDRHHEEVYLGNLKRFHFRELQVATNNFSSKNILGKGGFGNVYKGLLPDGTLVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTPNERLLVYPYMSNGSVASRLKGKPVLDWSTRKQIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKASNQKGAMLDWVRKIHQEKKLELFVDKDLKNNYDRIELEEMVQVALLCTQYLPGHRPKMSEVVRMLEGDGLAERWEASQRADINKCNKPHEFSSSDRYSDLTDDSSLQAQAMELSGPR 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1915 630 Gene3D Phosphorylase Kinase; domain 1 278 385 - -
Sto13g1915 630 SMART serkin_6 309 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g1915 630 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Sto13g1915 630 SUPERFAMILY Protein kinase-like (PK-like) 286 579 IPR011009 -
Sto13g1915 630 ProSiteProfiles Protein kinase domain profile. 309 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g1915 630 Pfam Protein kinase domain 310 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g1915 630 SMART LRR_typ_2 101 125 IPR003591 -
Sto13g1915 630 SMART LRR_typ_2 173 196 IPR003591 -
Sto13g1915 630 SMART LRR_typ_2 149 172 IPR003591 -
Sto13g1915 630 SUPERFAMILY L domain-like 38 200 - -
Sto13g1915 630 Pfam Leucine rich repeat N-terminal domain 38 75 IPR013210 -
Sto13g1915 630 MobiDBLite consensus disorder prediction 598 630 - -
Sto13g1915 630 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 630 - -
Sto13g1915 630 Gene3D Ribonuclease Inhibitor 35 217 IPR032675 -
Sto13g1915 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Sto13g1915 630 PANTHER PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 6 630 - -
Sto13g1915 630 Gene3D Transferase(Phosphotransferase) domain 1 386 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1915 Sto-Chr13 26535514 26538523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1915 7 630 Receptor kinase-like Gene Family AT5G16000 78.413 0.0 1000
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Sto13g1915 Pkinase 4.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1915 - - gmx:100798412 1092.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g1915 13 26535514 26538523 Sto13g1915 13 26535514 26538523 ECH