Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1914 ATGGCGTCTCCGGTAGTAATAACTGGTCGCGCATCTGCGACACGTGTCGCTCTGCTCCGTGCACTATCTACTGCCACGCCGACCTGGCTTACCTCTGCTCCGCCTGCGACGCCCGCATCCACGCCGCCAACCGCCTCGCCTCCCGCCACGACCGCGTCTGGCTCTGCGAGGCCTGCGAGCGCGCCCCCGCCGCCTTCCTCTGCAAGGCCGACGCCGCCTCCCTCTGCCACTCCTGCGACGCCGACATCCACTCCGCCAACCCCCTCGCCGCCCGCCACCACCGCGTCCCCATCTCCCCTCCTCCCCCTCCCCCCTCCTCCGACGACTCCCCCTTTCTGCCCGACGACGCTgaagacgacgacgacgacgctGAGGACGATGTCGTCGACGAAGAGGATGAACACGAGGCTGCCTCCTGGTTGCTGTTCCTTCTTGTTTGGTGGGGAGGTCGACGAGTATTTAGATCTCATGGATAGCAATTCTTGTGGCGACAACCACTACAGCAACATTAATCACCATTATGATAGTGTGGTCCCGGTTCAGCAACaaccccaccatttccatctCGCTTTGGACTTGGATTCCTCCAAATCCCCTGCTTACCCTTACAATGCTAATCCCTCTCTTTCCCAAAATGTTTCGTTCTCGTCGGTCGATGTCGGGATTGTACCGGAATCCACCGAAAtgagcggcggcggcggcggcgatgTGTCGGGCGGGCAATACTCACGACCCCCAAAAGGGACGATTGACCTATTTACTGGACCGCCCTTGCCCCTTGAGATTCCTTCGCAGCTTTCCCCGATGGATAGGGAGGCGAGGGTTCTGAGATAcagggagaagaagaagacgaggaAGTTTCAGAAGACGATAAGGTACGCTTCGAGGAAGGCTTATGCAGAAACCAGACCGCGTATCAAGGGTCGATTTGCTAAGAGGACGGAGGTAGAAGCTGAGGTTGATCAGATGTTTTCGACGACTCTAATGACGGAAAATGGAGGATATGGCATTGTTCCCTCTTTCTGA 1026 0.5283 MASPVVITGRASATRVALLRALSTATPTWLTSAPPATPASTPPTASPPATTASGSARPASAPPPPSSARPTPPPSATPATPTSTPPTPSPPATTASPSPLLPLPPPPTTPPFCPTTLKTTTTTLRTMSSTKRMNTRLPPGCCSFLFGGEVDEYLDLMDSNSCGDNHYSNINHHYDSVVPVQQQPHHFHLALDLDSSKSPAYPYNANPSLSQNVSFSSVDVGIVPESTEMSGGGGGDVSGGQYSRPPKGTIDLFTGPPLPLEIPSQLSPMDREARVLRYREKKKTRKFQKTIRYASRKAYAETRPRIKGRFAKRTEVEAEVDQMFSTTLMTENGGYGIVPSF 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1914 341 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 144 341 IPR045281 GO:0009909
Sto13g1914 341 MobiDBLite consensus disorder prediction 58 113 - -
Sto13g1914 341 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 1 144 341 - -
Sto13g1914 341 PRINTS Proline rich extensin signature 22 43 - -
Sto13g1914 341 PRINTS Proline rich extensin signature 43 59 - -
Sto13g1914 341 PRINTS Proline rich extensin signature 61 78 - -
Sto13g1914 341 PRINTS Proline rich extensin signature 81 106 - -
Sto13g1914 341 ProSiteProfiles CCT domain profile. 271 313 IPR010402 GO:0005515
Sto13g1914 341 MobiDBLite consensus disorder prediction 25 117 - -
Sto13g1914 341 Pfam CCT motif 271 313 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1914 Sto-Chr13 26524442 26525669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1914 144 341 C2C2-CO-like Transcription Factor Family AT3G02380 50.935 1.34e-53 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto13g1914 CCT 1.6e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1914 - - lja:Lj0g3v0340909.1 238.81