Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1903 ATGAACTGCCTCTGTGATGTAAGCATTTCTTGCTCCAAAAATGATTATCCTCAAAACCCAAATTGCTTTCCTCTTGTCTCTCATCCCCACATGCCACATGAACAGAACAGAACATTAGAGGCTTCTTCAGGAATTATGAATTACCCACAATTCCCTTCAAACCCATATCCATACACTCCCATATCCACATTCCAACTCCAACAATTCTCCAATTACACTAACTTCCCTCAGGACTTGAGCTCACCATCATCCTGCATCAGCAACAATTCCACTTCTGATGAAGCAGATGATCATCACCAGCATCAGCAGCAGCAGGAGCAGGAGGAGATGGTGATCAATGAGAGGAAGCACCGGAGGATGATATCGAACCGGGAGTCGGCCCGGAGGTCGCGGATGAGGAAGCAGAAGCACCTGGACGAGCTGTGGTCACAGGTGGTGTGGCTGAGGACAGAGAACCACCAGCTGATGGACAAGCTGAACCATGTGTGTGAGAGCCATGACAGAGTGGTTCAGGAGAATGCTCAGCTCAAAGAGGAAGCCTCCGAGCTCAGGCAGATGTTGAGGGACATGAGACTCAGTAGCCCCTCCCCTTGTCCTTCCTTGAGCCCTCTTGATGATATTGTCTACCTCGGATCTGATTGA 642 0.4922 MNCLCDVSISCSKNDYPQNPNCFPLVSHPHMPHEQNRTLEASSGIMNYPQFPSNPYPYTPISTFQLQQFSNYTNFPQDLSSPSSCISNNSTSDEADDHHQHQQQQEQEEMVINERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRTENHQLMDKLNHVCESHDRVVQENAQLKEEASELRQMLRDMRLSSPSPCPSLSPLDDIVYLGSD 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1903 213 SUPERFAMILY Leucine zipper domain 115 164 IPR046347 GO:0003700|GO:0006355
Sto13g1903 213 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 28 199 IPR044521 -
Sto13g1903 213 CDD bZIP_plant_GBF1 116 160 IPR045314 GO:0003700|GO:0006355
Sto13g1903 213 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 113 176 IPR004827 GO:0003700|GO:0006355
Sto13g1903 213 MobiDBLite consensus disorder prediction 80 108 - -
Sto13g1903 213 Pfam bZIP transcription factor 115 162 IPR004827 GO:0003700|GO:0006355
Sto13g1903 213 MobiDBLite consensus disorder prediction 92 108 - -
Sto13g1903 213 SMART brlzneu 109 175 IPR004827 GO:0003700|GO:0006355
Sto13g1903 213 Coils Coil 166 193 - -
Sto13g1903 213 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 118 133 IPR004827 GO:0003700|GO:0006355
Sto13g1903 213 Gene3D - 113 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1903 Sto-Chr13 26458805 26459943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1903 48 208 bZIP Transcription Factor Family AT3G30530 57.055 3.02e-52 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto13g1903 bZIP_1 1.8e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1903 - - gmx:100791105 192.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g1903 13 26458805 26459943 Sto13g1903 13 26458805 26459943 ECH