Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1893 ATGGTTCGTCGAGCTGATTTAGTTATAATTGGTGTCACTGTTGGTTTGGCTCTTGGGATTTTCATAGCTCTCCTTACATTTTTTGGTGTAAGATGGTACAAGAAACGTGCTCATCTCAGACAATCTTCAAGAGAGCCTAGTTTAACAACCCTTCCAATACGCACAAATGGATTAGGTGTAAGCACTGACTTCAGTGCCTCTCTTACAAGTACCACCACCACTGCAATGCCAGAAAATCTGCATAAAAATTCCCATTTTTCTTGGTGGAATCATCAAAATAAAGATCGGTTTTCTCCAACATCCGGCATTTTAAAGTACTCGTACAAAGATATCCAAAAGGCCACACAGAATTTCACAACTATTTTGGGAGAAGGATCATTTGGCACAGTTTATGAAGCCAGAATGCCTACAGGAGAGGTAGTAGCTGTGAAGGTGCTCGCTTCCAATTCTAGACAAGGGGAGAAAGAATTCCAAACCGAGGTGCTTTTGCTAGGGAGACTGCATCATCGGAACCTTGTGAATTTGTTAGGATATTCTGTAGATAAAGGACAGCGCATACTGGTATATGAGTTCATGAGTAATGGAAGTTTAGCAAACCTTCTATACAGTGAAGAGAAGTTTTTGAGTTGGAAAGAAAGGTTACAAATTGTTATCGATATATCTCACGGAATTGAATATCTTCATGAAGGAGCCGTCCCACCCGTCATACATCGTGATTTGAAGTCTGCCAATATATTGTTAGATCAATCAATGAGAGCTAAGGTAGCTGATTTCGGGCTCTCAAAGGAAGAGGTCTTCGACGGCCGGAATTCCGGCCTTAAAGGTACATACGGCTACATGGACCCAGAATACATTTCCACAAACAAGTTCACAATGAAGAGCGACATCTACAGCTTCGGCATCATCATTTTCGAGCTCATTACAGCCATTCACCCACATCAAAATTTGATGGAATACATTAACCTTGCTTCAATGGATCATGATGGCGTAGACGAGATACTTGACAAGCAACTTGTAGGAAAATGCAGCCTTGTAGAAGTGAGGCAGCTTGCCAAAATTGCACACAAGTGTTTGCACAAATCACCTAGGAAACGCCCCTCCATTGGTGAGGTTTCACAAGGTATATTGAGGATAAAAGAAAGACATCTTGTGAAAGAAGATACAATGTCATTTGCAGGCAGTAATATTTCCAGAGCTCTGAGTCGAATCGAGGATCAACAAGTTGAACTAAGCAACTCATTCACACTTCTGTTTCCAGAAGATGTACTGGCCAAACAGCCACTCTTCTGCTTTACACCCAGGTGTTGCCAGCTTTTTTCACCAACGTTTGTGTTTCTCGTAGACAGTGACAACTTTGAAATGTTAGGCACCCAGTTTCCTACAGGACCAGTATTATGTTCTTCTGAACTTAAGGGCAACTCACTCTCAATCTCAGCCTCGTCTTCCATCACAGTTTCTTCTAGTTTGGAGAAAGGGTTTCTTGCATTTCCACCTTTTATTCCGTGTGGGAGAACTTGCCTTACGAAAAAGAGTATTCTTCATGATCTAACAGCTTCCTTGCTTCAATACATATAA 1575 0.4146 MVRRADLVIIGVTVGLALGIFIALLTFFGVRWYKKRAHLRQSSREPSLTTLPIRTNGLGVSTDFSASLTSTTTTAMPENLHKNSHFSWWNHQNKDRFSPTSGILKYSYKDIQKATQNFTTILGEGSFGTVYEARMPTGEVVAVKVLASNSRQGEKEFQTEVLLLGRLHHRNLVNLLGYSVDKGQRILVYEFMSNGSLANLLYSEEKFLSWKERLQIVIDISHGIEYLHEGAVPPVIHRDLKSANILLDQSMRAKVADFGLSKEEVFDGRNSGLKGTYGYMDPEYISTNKFTMKSDIYSFGIIIFELITAIHPHQNLMEYINLASMDHDGVDEILDKQLVGKCSLVEVRQLAKIAHKCLHKSPRKRPSIGEVSQGILRIKERHLVKEDTMSFAGSNISRALSRIEDQQVELSNSFTLLFPEDVLAKQPLFCFTPRCCQLFSPTFVFLVDSDNFEMLGTQFPTGPVLCSSELKGNSLSISASSSITVSSSLEKGFLAFPPFIPCGRTCLTKKSILHDLTASLLQYI 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1893 524 ProSitePatterns Protein kinases ATP-binding region signature. 122 144 IPR017441 GO:0005524
Sto13g1893 524 PANTHER OS01G0750732 PROTEIN 9 412 - -
Sto13g1893 524 SUPERFAMILY Protein kinase-like (PK-like) 86 372 IPR011009 -
Sto13g1893 524 Gene3D Transferase(Phosphotransferase) domain 1 192 397 - -
Sto13g1893 524 Pfam Protein kinase domain 120 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g1893 524 CDD STKc_IRAK 122 378 - -
Sto13g1893 524 SMART serkin_6 116 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g1893 524 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 2 9 412 - -
Sto13g1893 524 ProSiteProfiles Protein kinase domain profile. 116 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g1893 524 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Sto13g1893 524 Gene3D Phosphorylase Kinase; domain 1 81 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1893 Sto-Chr13 26354722 26361008 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1893 58 371 Receptor kinase-like Gene Family AT3G19300 38.889 1.77e-68 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Sto13g1893 Pkinase 4.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1893 - - gmx:100819995 668.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g1893 13 26354722 26361008 Sto13g1893 13 26354722 26361008 ECH