Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto13g1884 | ATGGGTTCTGTTTGTTGCTGTTTGAGTGTTGATGAGTTGGAAGATTATGTAAATCCAAATAGTTCTGTATATAGGAATTGTGTGTGTCTCAGTTGCTTCGTACAGAACTTTTTGACTGtgTACACAACAATATTCCGTAGAGGGGAAGTGCATTCTCTTCCTTCATCTATACAGGGGGCAGCATCTATGACTTCTACAGCTTCACTTGATAATTCACTATCAGACATGTACCGTTCTCCTCCAAGGCCCTTGCCTTATGATGCAGACCCCAGGCATTTCCGTTCACAGCATGATGGATTTATTTCAAGACACGAGAAGGGTTCAAGCCATTTGAACGAGGAGACAGAACCTCTAAGAAGTGATGTAGATATGGATCAAGAATCTCTAAGTTCTGGAGGCAAATGTAATGAATCTGCCTATGAAGATGGATCAAAGGAATACCGTTCTAAGTCCTCACAAAGACTCTCATCAGCAAAATATACAACTGGTGTTGGTCTTGTTTATTCATCATCAGAAGAGGAGGATGTTTGTCCGACTTGTCTTGAAGaATATACTCTAGAGAACCCAAAGATATTGACGAAGTGCTCTCATCATTTTCACCTTAGTTGCATTTATGAGTGGATGGAGAGAAGTGAAAACTGTCCAGTTTGTGGGAAGGTAATTTTTCCTCTTGAATCTTGA | 681 | 0.4023 | MGSVCCCLSVDELEDYVNPNSSVYRNCVCLSCFVQNFLTVYTTIFRRGEVHSLPSSIQGAASMTSTASLDNSLSDMYRSPPRPLPYDADPRHFRSQHDGFISRHEKGSSHLNEETEPLRSDVDMDQESLSSGGKCNESAYEDGSKEYRSKSSQRLSSAKYTTGVGLVYSSSEEEDVCPTCLEEYTLENPKILTKCSHHFHLSCIYEWMERSENCPVCGKVIFPLES | 226 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto13g1884 | 226 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE | 1 | 221 | - | - | |
Sto13g1884 | 226 | MobiDBLite | consensus disorder prediction | 104 | 151 | - | - | |
Sto13g1884 | 226 | Pfam | RING-H2 zinc finger domain | 172 | 217 | IPR024766 | GO:0008270 | |
Sto13g1884 | 226 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 149 | 222 | IPR013083 | - | |
Sto13g1884 | 226 | MobiDBLite | consensus disorder prediction | 104 | 123 | - | - | |
Sto13g1884 | 226 | SUPERFAMILY | RING/U-box | 172 | 223 | - | - | |
Sto13g1884 | 226 | SMART | ring_2 | 177 | 217 | IPR001841 | - | |
Sto13g1884 | 226 | ProSiteProfiles | Zinc finger RING-type profile. | 177 | 217 | IPR001841 | - | |
Sto13g1884 | 226 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 1 | 221 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto13g1884 | Sto-Chr13 | 26303196 | 26305608 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto13g1884 | 1 | 221 | C3H Transcription Factor Family | AT5G38895 | 57.658 | 1.98e-93 | 275 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto13g1884 | - | - | gmx:100788192 | 393.275 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Sto13g1884 | 13 | 26303196 | 26305608 | Sto13g1884 | 13 | 26303196 | 26305608 | ECH |