Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1884 ATGGGTTCTGTTTGTTGCTGTTTGAGTGTTGATGAGTTGGAAGATTATGTAAATCCAAATAGTTCTGTATATAGGAATTGTGTGTGTCTCAGTTGCTTCGTACAGAACTTTTTGACTGtgTACACAACAATATTCCGTAGAGGGGAAGTGCATTCTCTTCCTTCATCTATACAGGGGGCAGCATCTATGACTTCTACAGCTTCACTTGATAATTCACTATCAGACATGTACCGTTCTCCTCCAAGGCCCTTGCCTTATGATGCAGACCCCAGGCATTTCCGTTCACAGCATGATGGATTTATTTCAAGACACGAGAAGGGTTCAAGCCATTTGAACGAGGAGACAGAACCTCTAAGAAGTGATGTAGATATGGATCAAGAATCTCTAAGTTCTGGAGGCAAATGTAATGAATCTGCCTATGAAGATGGATCAAAGGAATACCGTTCTAAGTCCTCACAAAGACTCTCATCAGCAAAATATACAACTGGTGTTGGTCTTGTTTATTCATCATCAGAAGAGGAGGATGTTTGTCCGACTTGTCTTGAAGaATATACTCTAGAGAACCCAAAGATATTGACGAAGTGCTCTCATCATTTTCACCTTAGTTGCATTTATGAGTGGATGGAGAGAAGTGAAAACTGTCCAGTTTGTGGGAAGGTAATTTTTCCTCTTGAATCTTGA 681 0.4023 MGSVCCCLSVDELEDYVNPNSSVYRNCVCLSCFVQNFLTVYTTIFRRGEVHSLPSSIQGAASMTSTASLDNSLSDMYRSPPRPLPYDADPRHFRSQHDGFISRHEKGSSHLNEETEPLRSDVDMDQESLSSGGKCNESAYEDGSKEYRSKSSQRLSSAKYTTGVGLVYSSSEEEDVCPTCLEEYTLENPKILTKCSHHFHLSCIYEWMERSENCPVCGKVIFPLES 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1884 226 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 221 - -
Sto13g1884 226 MobiDBLite consensus disorder prediction 104 151 - -
Sto13g1884 226 Pfam RING-H2 zinc finger domain 172 217 IPR024766 GO:0008270
Sto13g1884 226 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 149 222 IPR013083 -
Sto13g1884 226 MobiDBLite consensus disorder prediction 104 123 - -
Sto13g1884 226 SUPERFAMILY RING/U-box 172 223 - -
Sto13g1884 226 SMART ring_2 177 217 IPR001841 -
Sto13g1884 226 ProSiteProfiles Zinc finger RING-type profile. 177 217 IPR001841 -
Sto13g1884 226 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1884 Sto-Chr13 26303196 26305608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1884 1 221 C3H Transcription Factor Family AT5G38895 57.658 1.98e-93 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1884 - - gmx:100788192 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g1884 13 26303196 26305608 Sto13g1884 13 26303196 26305608 ECH