Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1876 ATGGGTTGGCCTATCTTTGGAGAAACCACTGAGTTTCTCAAGCAAGGCCCTAGCTTCATGAAAAACCAAAGagctagGTTTGGGAGTTTCTTCAAATCTCATATATTGGGGTGTCCTACAATAGTGTCCATGGATGCAGAGTTGAATAGATACATACTTATGAATGAATCAAAAGGACTTGTTCCTGGCTACCCTCAATCCATGTTAGATATCTTAGGCAAATCCAATATTGCAGCTGTTCATGGCTCCACTCACAAGTACATGAGAGGTGCTCTCCTATCCATCATCAGTCCCTCCATGATGAAACACCATCTCCTCCCCAAGATTGATCACTTCATGAGACACCATTTGAGCAATTGGGATAACCAAGTCATCAACATTCAACACAAGACCAAACAGATGGCTTTCTTATCTTCTCTGAAGCAAATTGCAGGGATCGAATCCACCTCTCCAATTTCCCATAATTTCATGTCCGAGTTCTTCAAGCTTGTTCTGGGGACGATCTCTCTGCCGATTGACCTTCCCGGGGCTAATTATCGTCGTGGGGTCCAGGCAAGGAAGAACATTGTGAGCATTGTGAGGGATTTGGTGGAGGAGAGAGGAGGGTTTCTGGGGAGAATCACCAAGACATGCTTGAAAGAGCATATGGCaataagagagaggaagaagccAGAGGATCCAATTGACTGTGAAGATCTGAAATCTATGAAGTTTACTCGGGCTGATAAGAGCATAGAATCACAAAGCTACTTCTTGATATTTGGAGGAGGAACCAGACAGTGTCCAGGAAAAGAGTTGGGGATAGCAGAAATTTGCACTTTCTTGCACTATTTTGTAACTAGATAcagGTGGGAAGAAGTAGGAGGAGAAAAAGTAATGAAATTTCCAAGAGTGGAAGCACCAAATGGATTGCACATAAGAGTGTCTTCATATTAG 936 0.4167 MGWPIFGETTEFLKQGPSFMKNQRARFGSFFKSHILGCPTIVSMDAELNRYILMNESKGLVPGYPQSMLDILGKSNIAAVHGSTHKYMRGALLSIISPSMMKHHLLPKIDHFMRHHLSNWDNQVINIQHKTKQMAFLSSLKQIAGIESTSPISHNFMSEFFKLVLGTISLPIDLPGANYRRGVQARKNIVSIVRDLVEERGGFLGRITKTCLKEHMAIRERKKPEDPIDCEDLKSMKFTRADKSIESQSYFLIFGGGTRQCPGKELGIAEICTFLHYFVTRYRWEEVGGEKVMKFPRVEAPNGLHIRVSSY 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1876 311 Gene3D Cytochrome P450 1 238 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g1876 311 PANTHER CYTOCHROME P450 26 213 242 - -
Sto13g1876 311 PANTHER CYTOCHROME P450 26 247 309 - -
Sto13g1876 311 PANTHER CYTOCHROME P450 26 1 201 - -
Sto13g1876 311 SUPERFAMILY Cytochrome P450 2 296 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g1876 311 Pfam Cytochrome P450 237 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g1876 311 Gene3D Cytochrome P450 239 298 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g1876 311 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 201 - -
Sto13g1876 311 PANTHER CYTOCHROME P450 FAMILY PROTEIN 247 309 - -
Sto13g1876 311 PANTHER CYTOCHROME P450 FAMILY PROTEIN 213 242 - -
Sto13g1876 311 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 254 263 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1876 Sto-Chr13 26205845 26208370 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1876 225 311 Cytochrome P450 AT5G38970 60.920 6.00e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1876 K09590 - gmx:100805958 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g1876 13 26205845 26208370 Sto13g1876 13 26205845 26208370 ECH