Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1873 ATGGGCTTCTCTTTGATTCCCATACTTCGATCTCTTCCCAAAGCGAGCTCCGTCATTCTTCTATTCTTGCTTCTACTCATTTGCACTTGCTTCACTTCAACAGAAGCTTACGATCCGCTTGATCCAAATGGAAATATCACAATCAAATGGGATATCATAAGCTGGACGCCTGATGGTTATGTTGCTGTAGTTACTATGAACAATTTCCAACAATATCGTCATATCCCGGCACCGGGATGGTCACTAGGATGGACATGGGCAAAGAAGGAGGTGATTTGGAGCATGATGGGATCACAGGCCACTGAACAAGGGGATTGTTCAAAATTTAAGGGGAATGTCCCACATTGCTGTAAGAAGGACCCAACTATTGTAGATTTACTTCCAGGAACACCTTACAATCAGCAAATTGCAAATTGCTGCAAAGGTGGAGTACTCAGCTCATGGGCACAGGATCCAACCAATGCCGTAGCTTCGTTTCAGGTAAGTGTTGGCAGAGCTGGAACCACCAACAAAACAGTCAAAGTGCCGAAAAACTTTACCCTGAAAGCACCAGGACCAGGTTATACTTGTGGGCCAGCAAAAGTTGTGAGACCCACTCAATTTCTTCAAGCAGACAAAAGGAGAGTAACACAAGCACTAATGACATGGAATGTGACATGTACATATTCACAGTTTCTAGCTCAAAAAAATCCCACTTGCTGCGTCTCACTCTCATCTTTCTATAATGATACTATTGTACCTTGCCCAACATGTTCATGTGGCTGCAAGGGCAACTCATCTAGCTGTGTAGAGGCAGATACACCACATTTGGAACAAGTCGTTTCTGGTTCTGGAAAGAATAGTTTGACACCTTTGGTTCAATGTACTAGTCATATGTGCCCCATTCGAGTCCACTGGCACGTTAAGCTTAACTACAAAGAGTACTGGCGTGTTAAGGTCACTATTACCAATTTTAACTATAGGCAGAATTATTCGGAGTGGAACTTGGTTGTTCAACACCCAAACTTTGACAATCTGACCCAACTTTTCAGTTTCAACTACAAGTCCTTAACTCCTTATGGAGCAATAAATGACACGGCAATGCTTTGGGGAGTTAAGTTCTATAATGATTTGCTTAATCAAGCTGGTGAATTTGGTAATGTACAGTCAGAGCTACTTTTCCGAAAGGATAAATCTACTTTCACTTTTGAGAAGGGTTGGGCTTTCCCTCGGAGAATTTATTTCAATGGTGACAATTGTGTGATGCCACCACCAGATGCTTATCCGTGGTTGCCTAGTGCTGGTTCCCGACAAGAAGTTTCACTGCTTGCTCTAATGATGGCTTGCTTGATATCCTTGGTCCTTTATGCATTTGCTTAG 1359 0.4275 MGFSLIPILRSLPKASSVILLFLLLLICTCFTSTEAYDPLDPNGNITIKWDIISWTPDGYVAVVTMNNFQQYRHIPAPGWSLGWTWAKKEVIWSMMGSQATEQGDCSKFKGNVPHCCKKDPTIVDLLPGTPYNQQIANCCKGGVLSSWAQDPTNAVASFQVSVGRAGTTNKTVKVPKNFTLKAPGPGYTCGPAKVVRPTQFLQADKRRVTQALMTWNVTCTYSQFLAQKNPTCCVSLSSFYNDTIVPCPTCSCGCKGNSSSCVEADTPHLEQVVSGSGKNSLTPLVQCTSHMCPIRVHWHVKLNYKEYWRVKVTITNFNYRQNYSEWNLVVQHPNFDNLTQLFSFNYKSLTPYGAINDTAMLWGVKFYNDLLNQAGEFGNVQSELLFRKDKSTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPSAGSRQEVSLLALMMACLISLVLYAFA 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1873 452 PIRSF COBRA 9 452 IPR006918 GO:0010215|GO:0031225
Sto13g1873 452 Pfam COBRA-like protein 60 223 IPR006918 GO:0010215|GO:0031225
Sto13g1873 452 PANTHER COBRA-LIKE PROTEIN 17 451 - -
Sto13g1873 452 PANTHER PROTEIN COBRA 17 451 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1873 Sto-Chr13 26160151 26162878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1873 12 450 COBRA Gene Family AT3G02210 72.197 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1873 - - gmx:100783820 830.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g1873 13 26160151 26162878 Sto13g1873 13 26160151 26162878 ECH