Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1859 ATGTTTCCTTCTTCCTCTACTTCACTTATCAAATGGCGTTTCTTTCACTGCCCCATCTCCTCTCTGCTCCTTCTGCAACTCTACTTTCTCTTGTGGGTCCTCTCGACGTCTCCAGCTCACGCCGCTCTCTCCGATTCCGACAAATCAGTGCTTCTTCAGTTCAAGAATTCAGTCTCCGATCCGTCAGGGCTGCTTTCGACCTGGAATTCGGCTACCGATTCTAAGCACTGCTCTTGGCTCGGCGTCTCCTGCGACTCCAGTTCACGGGTTGTGTCACTCAACATTACTGGAAATGGCGGTGGAGGTAATCGAAATTCTTTTCCTTGTTCTGATTCTTCTGAATTCCCACTTTATGGGTTTGGAATTAGGAGAGGCTGTGGTGGTAGTAGAGGGGCTTTGTTTGGGAAGGTTTCGCCGCTGATCAGTAGGTTAACTGAGCTCAGGATTCTGTCACTCCCGTTTAACGGTTTTAAGGGTGAAATTCCGGACGAAATCTGGGGTATGGAAAAGTTGGAGGTTCTTGACCTGGAGGGAAATTCTATAACTGGGTCTCTTCCTTCTCATTTTGATGGTTTGAAAAACTTGCGGGTTCTTAACCTTGGGTTTAATAGAATTGTTGGGGAGATACCAGACTCACTTTCACGCCTTGCAAGTTTGGAAATTTTGAATTTAGCTGCGAATGGCTTTAACGGATCTGTTCCTGGGTTCATCGGTAAGCTGAAAGGAGTATATCTTTTGTCTAATCTTCTCAGTGGTCCCTTACTACCTGAGATCGGGAATAATTGTGGGAAGCTTGAGCATCTGGATTTGTCGGGTAATTTCTTAGTTCAGAGAATTCCTGGTAGTTTGGGAAATTGCAGTCAGTTAAGGACACTTTTGCTGTATTCGAACTTGTTTGAAGAGGTTATTCCTGCCGAACTTGGTAAGCTTAAAAAGCTTGAAGTGTTGGATGTTTCAAGGAATGCTCTCAGTGGTCCAGTACCTCCGGAGATTGGGAATTGTTCGGAGTTGTCTGTCCTTGTGCTATCTAATCTTTTCAATCCGCTTCCAGAAGCTAACAACAGTATTCGGGACACTTCACAGTTGATTTCGATAAATGatgaattgaattattttgaaGGTTCCATGCCTGTGGAAATTACTGCCCTCCCAAAGCTGAGAATATTGTGGGCTCCAAGGGCAACTCTGGAAGGCAATTTTCCAAGAAATTGGGGTGCTTGTGGTAGCTTAGAGATGGTCAATTTGGCTCAGAATTATTTCACTGGGGGATTTCCTAATCAGCTTAGTGGCTGCAAGAAGCTTCATTTTCTTGATTTAAGCTCAAACAACCTTACAGGGGAGCTTGCTGAAGAATTTCCGGTTCCCTGTATGACTGTGTTTGATGTTAGTGGGAATGTGTTGTCTGGTTATATTCCTGAATTCTCCAATAATACCTGTCCTTCAGTTACTTCCTGGAACGGCAATTTGTTTGAACTTGATGATGCGTCAATTCCGTATTTGTCGTTTTTTTCATCAAAGGTTCATGATGGATCCCTTTTGAATGTTGGAGAAAACAAGCTTGCAGGATCATTTCCGACAAGTTTGTTTGATAAATGTGATGGATTAGATGCGTTACTGTTAAATGTCAGTTACAACAGGTTATCCGGCCAGATTCCCGCGAATCTTCGAGGAATGTGCGGGTCATTGAAATTTTTGGACGTATCTGGAAATTATATTAACGGACCTATCCCTGTGGGTTTAGGGGATTTGGTATCTCTTGTTTCTCTGAATCTTAGTTGGAATCAGTTACAAGGTCCGATTCCCATCAGCCTTGGTCAGATGAGAAATCTGGTTTTTCTTTCCTTGGCCGGTAATAATTTAAATGGCTCCATTCCCACCAGCTTGGGGCAGTTGTACTCTTTGGAAGTTTTGGATCTTTCTTCAAACTCTCTTACAGGTGAGATTCCTGAAGGTCTTGAGAATTTGAGAAATTTGTCTGGTCTTCTGCTCAATAGCAACAAACTTTCGGGACATATTCCTACCGGTTTGGCAAATGTCACCACACTCTCGGCATTTAATGTGTCCTTCAATAACTTATCTGGATCCTTACCGTCTAATAGTAACTTGATAAAATGCAGCAGTGCTGTTGGGAATCCATTTTTACGTCCTTGCCATATGTACTCTTTGGCCGTTCCATCAGCAGATCAACAAGGACGGGTTGAAAGTTCTAATTCTTATACTGCTGCACCACCAGAGGGTACTAGCAAAGAGAGTGGAAATGGTTTCAATTCCATCGAAATAGCATCTATAACATCTGCATCTGCCATTGTTTCTGTCCTTATAGCCCTAATTGTTCTGTTCTTCTATACTCGCAAGTGGAACTCCAGGTCCAGGGTTGTTGGTTCCACAAGGAAAGAAGTCATAGTATTTACAGACATTGGGGTTCCATTGACTTTTGATACTGTTGTTCGTGCCACTGGAAATTTCAATGCGAGCAACTGCATTGGAAATGGAGGATTTGGGGCAACCTATAAAGCAGAGATATCTCCAGGAAATTTGGTGGCAATAAAACGTCTAGCAGTTGGACGATTCCAAGGTGTACAACAATTTGATGCAGAGATTAAGACCCTCGGAAGGCTTCGTCATCCAAATCTTGTCACTTTGTTTGGTTATCATGCTAGTGAGACAGAGATGTTTCTTATTTACAATTATTTGCCAGGTGGGAACCTGGAAAAGTTCATCCAGGAGAGATCCACAAGGGCTGTGGATTGGAGAATTCTTCACAAGATCGCACTGGACATAGCCCGGGCACTTGCCTACCTGCATGATCAGTGTGTACCGCGAGTCCTTCATCGTGATGTCAAGCCCAGCAACATCCTGTTGGATGATGATTTCAATGCTTATCTGTCAGACTTTGGATTGGCCAGACTTCTGGGGACTTCAGAAACCCATGCTACCACCGGCGTGGCAGGAACATTTGGTTACGTTGCTCCTGAATACGCCATGACGTGCCGGGTTTCTGACAAGGCTGATGTGTATAGCTACGGTGTTGTGCTTCTAGAACTGCTCTCAGACAAGAAGGCATTGGATCCTTCATTTTCTTCATACGGAAATGGGTTCAACATAGTAGCGTGGGCGTGCCTGCTACTGCGACAAGGCCGGGCAAAGGAGTTCTTCACCGCTGGACTATGGGATGCAGGACCCTCAGATGATTTGGTAGAAGTCTTACACCTAGCCATTATGTGTACGGTTGATTCGCTCTCTACAAGACCTTCGATGAAACAGGTTGTGCGACGGCTTAAGCAACTTCAACCGCCATCATGCTAG 3306 0.441 MFPSSSTSLIKWRFFHCPISSLLLLQLYFLLWVLSTSPAHAALSDSDKSVLLQFKNSVSDPSGLLSTWNSATDSKHCSWLGVSCDSSSRVVSLNITGNGGGGNRNSFPCSDSSEFPLYGFGIRRGCGGSRGALFGKVSPLISRLTELRILSLPFNGFKGEIPDEIWGMEKLEVLDLEGNSITGSLPSHFDGLKNLRVLNLGFNRIVGEIPDSLSRLASLEILNLAANGFNGSVPGFIGKLKGVYLLSNLLSGPLLPEIGNNCGKLEHLDLSGNFLVQRIPGSLGNCSQLRTLLLYSNLFEEVIPAELGKLKKLEVLDVSRNALSGPVPPEIGNCSELSVLVLSNLFNPLPEANNSIRDTSQLISINDELNYFEGSMPVEITALPKLRILWAPRATLEGNFPRNWGACGSLEMVNLAQNYFTGGFPNQLSGCKKLHFLDLSSNNLTGELAEEFPVPCMTVFDVSGNVLSGYIPEFSNNTCPSVTSWNGNLFELDDASIPYLSFFSSKVHDGSLLNVGENKLAGSFPTSLFDKCDGLDALLLNVSYNRLSGQIPANLRGMCGSLKFLDVSGNYINGPIPVGLGDLVSLVSLNLSWNQLQGPIPISLGQMRNLVFLSLAGNNLNGSIPTSLGQLYSLEVLDLSSNSLTGEIPEGLENLRNLSGLLLNSNKLSGHIPTGLANVTTLSAFNVSFNNLSGSLPSNSNLIKCSSAVGNPFLRPCHMYSLAVPSADQQGRVESSNSYTAAPPEGTSKESGNGFNSIEIASITSASAIVSVLIALIVLFFYTRKWNSRSRVVGSTRKEVIVFTDIGVPLTFDTVVRATGNFNASNCIGNGGFGATYKAEISPGNLVAIKRLAVGRFQGVQQFDAEIKTLGRLRHPNLVTLFGYHASETEMFLIYNYLPGGNLEKFIQERSTRAVDWRILHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWACLLLRQGRAKEFFTAGLWDAGPSDDLVEVLHLAIMCTVDSLSTRPSMKQVVRRLKQLQPPSC 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1859 1101 SMART LRR_typ_2 310 334 IPR003591 -
Sto13g1859 1101 SMART LRR_typ_2 192 216 IPR003591 -
Sto13g1859 1101 SMART LRR_typ_2 262 286 IPR003591 -
Sto13g1859 1101 SMART LRR_typ_2 655 678 IPR003591 -
Sto13g1859 1101 SMART LRR_typ_2 168 191 IPR003591 -
Sto13g1859 1101 SMART LRR_typ_2 583 607 IPR003591 -
Sto13g1859 1101 SMART LRR_typ_2 631 654 IPR003591 -
Sto13g1859 1101 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 519 1100 - -
Sto13g1859 1101 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 25 447 - -
Sto13g1859 1101 Pfam Leucine Rich Repeat 633 655 IPR001611 GO:0005515
Sto13g1859 1101 Pfam Leucine Rich Repeat 264 286 IPR001611 GO:0005515
Sto13g1859 1101 SUPERFAMILY L domain-like 240 699 - -
Sto13g1859 1101 PRINTS Leucine-rich repeat signature 434 447 - -
Sto13g1859 1101 PRINTS Leucine-rich repeat signature 631 644 - -
Sto13g1859 1101 Gene3D Transferase(Phosphotransferase) domain 1 898 1098 - -
Sto13g1859 1101 ProSitePatterns Serine/Threonine protein kinases active-site signature. 942 954 IPR008271 GO:0004672|GO:0006468
Sto13g1859 1101 SUPERFAMILY Protein kinase-like (PK-like) 804 1093 IPR011009 -
Sto13g1859 1101 Pfam Leucine rich repeat N-terminal domain 45 85 IPR013210 -
Sto13g1859 1101 ProSitePatterns Protein kinases ATP-binding region signature. 828 850 IPR017441 GO:0005524
Sto13g1859 1101 Pfam Leucine rich repeat 170 228 IPR001611 GO:0005515
Sto13g1859 1101 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 519 1100 - -
Sto13g1859 1101 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 25 447 - -
Sto13g1859 1101 SMART serkin_6 822 1100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g1859 1101 ProSiteProfiles Protein kinase domain profile. 822 1096 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g1859 1101 Gene3D Ribonuclease Inhibitor 244 351 IPR032675 -
Sto13g1859 1101 Gene3D Ribonuclease Inhibitor 498 715 IPR032675 -
Sto13g1859 1101 CDD STKc_IRAK 828 1096 - -
Sto13g1859 1101 Gene3D Ribonuclease Inhibitor 352 490 IPR032675 -
Sto13g1859 1101 SMART LRR_sd22_2 310 336 - -
Sto13g1859 1101 SMART LRR_sd22_2 631 654 - -
Sto13g1859 1101 SMART LRR_sd22_2 168 194 - -
Sto13g1859 1101 Gene3D Ribonuclease Inhibitor 43 243 IPR032675 -
Sto13g1859 1101 Gene3D Phosphorylase Kinase; domain 1 783 897 - -
Sto13g1859 1101 Pfam Protein kinase domain 825 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g1859 1101 ProSiteProfiles Leucine-rich repeat profile. 633 656 IPR001611 GO:0005515
Sto13g1859 1101 SUPERFAMILY L domain-like 77 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1859 Sto-Chr13 26038835 26042260 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1859 41 1101 Receptor kinase-like Gene Family AT3G02130 65.505 0.0 1365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Sto13g1859 Pkinase 3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1859 - - gmx:100803891 1603.57