Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1857 ATGGAGAGTGTTGGAATGACAGTGGCTATGGTAATATCTCAGATTCTGGACGTGGGAAAGAACACTATTGTCAAGAAAGCCACCAACAATGGAATGAGCCAATTTGTGTTCATTTTGTATACCAATGTCCTTTCCCTCTTTGTCCTTCTACCTTCCACCTTCCTCTATTATAGAAACAGAGGCCCTCCTCCTATCTCAGCCTGCATTATCGGCAAAATCCTTCTCTTTGCGTTTCTCGGGTATGCAGGGCAAATATGCTTGTACGAGGGTATGGGATTAAGCTCTCCCACATTGGTATCAGCTATGCTGGATCTTATGCCAGCTTTTACTTTCATATTTGCTGTTGTTTCCAGAATGGAGAATCTAGATTTGAGAGTACGAAGCAGCCAAGCAAAATGTGTTGGTACAATGGTGTCCATCGTTGGGGCACTAGTTGTGACCTTATACAGAGGCTTGCCAATTACTATTCTGCCCCaactgccacatcatcatcatcaaccaaATGGGATTTTACTCTCACACCAACCAAATAATTGGCTTCTTGGAGGCATTCTCCTAGCAATTTCTAGCGTTTGTATCTCTCTCATAAATATTGTCCAGACTTGGATTCTCAAGGACTATCCAACAGAGTTAATGGTAGCAACAATTTCTTTTAGTTTTTCGACAATCCTATCAGCCGTAGTAGCTTTTTTCACACAGAGAAACCCAAAATATTGGATACTTAGACCTAATGTGGAGTTGTCTGCCATATTTTATACGGCTCTTTTTCAAGCATTCATACTAATTGTGATGTATGGATGGGCATGTCGTAAGAAGGGACCACTTTATGTTGCTATATTCAGCCCCTTCGGAATAGTTATTGCACTTTGCATGGGCATTGTGTTTTTGGGAGACACTCTTTTTCTAGGaagAATGATAGGTTGTGTTATAATAGCTGTTGGATTTTATGGTGTGATATGGGGGATAGctcaagagagaaagaagatggTGAATCATAACAATAATGAAATCTCTACCTACGTCTCATCTTCAACCCCTCTGCTCTACAACAAAAGTACAGACACATAG 1068 0.3886 MESVGMTVAMVISQILDVGKNTIVKKATNNGMSQFVFILYTNVLSLFVLLPSTFLYYRNRGPPPISACIIGKILLFAFLGYAGQICLYEGMGLSSPTLVSAMLDLMPAFTFIFAVVSRMENLDLRVRSSQAKCVGTMVSIVGALVVTLYRGLPITILPQLPHHHHQPNGILLSHQPNNWLLGGILLAISSVCISLINIVQTWILKDYPTELMVATISFSFSTILSAVVAFFTQRNPKYWILRPNVELSAIFYTALFQAFILIVMYGWACRKKGPLYVAIFSPFGIVIALCMGIVFLGDTLFLGRMIGCVIIAVGFYGVIWGIAQERKKMVNHNNNEISTYVSSSTPLLYNKSTDT 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1857 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 224 321 - -
Sto13g1857 355 PANTHER WAT1-RELATED PROTEIN 8 335 - -
Sto13g1857 355 Pfam EamA-like transporter family 18 147 IPR000620 GO:0016020|GO:0016021
Sto13g1857 355 Pfam EamA-like transporter family 182 319 IPR000620 GO:0016020|GO:0016021
Sto13g1857 355 PANTHER WAT1-RELATED PROTEIN 8 335 IPR030184 GO:0016021|GO:0022857
Sto13g1857 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1857 Sto-Chr13 25990056 26024323 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1857 9 325 Nodulin-like Gene Family AT5G40240 39.198 1.39e-75 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1857 - - qsu:112035593 361.688