Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1855 ATGGGATTAAGTTCTCCAACATTAGTGTCTGCTATGACGGATCTTacgccagcttttacttacatATTTGCTGTTGCTTCCAGGATGGAGAATCTAGATTTGAGAGTACGAAGCAGCCAGGCAAAATGTGTTGGCACAGTAGTGTCCATCATAGGGGCATTAGTTGTGACCTTATACAGAGGCTTGCCAATTACTATTTTGCCCCAACAAAGTGGGAATTTACTCTCACACCAACCAAATTGGCTTCTTGGAGGCATTCTCCTTGCACTTTCTAGcgtttttatctctctcttaaATATTGTCCAGACTTGGATTCTCAAGGACTATCCAACAGAGTTAATGGCTCTTTTTCATGCATTCATAATTGTGATGAATGGATGGGCATGTCGTAAGAAGGGACCAGTTTATGTTGCTATATTCAGCCCCTTGGGAATAGTTATTGCACTTTGCATGGGCATTGTAATGATAGGTTGTGTGATAATAGCTATTGGATTTTATGGTGTGATATGGGGGATAGctcaagagagaaagaagatggTGAATCATAACAATAATGAAATCTCTACCTACGTCTCATCTTCAACCCCTCTGCTCTACAACAAAAGCATAGACACATACATAGAGACAGAAAGGGCAGCAGAGGCTGAAGCTGAGAAGAGCACTGTGACTGAGCCATCGGTAATTTGTAATGGAGAAACAGTGGTTACAACACAAGGGGAGACGGTGCACGAGGCGCCGGCGAACGACGGCAAGGCCGAGCGAGGGGATGATGACGAGTTAGGAAACTCCGAAAAGTTTAGACCCTGGAATCTGGCAAATCGGAAAGCTAGGCGTAAAGGAGGCAATTACAAACGAGTGGATCAAGGCGGGAATCAAGGTAGTGGTAAGAATGTGTTAGCAAGTCAACGGGCTAATAATGGAAATCAATCTCGTTTTAACGTCCTTAGGGATGCGGAGGAGATTTTGGAAGTTAATATGGATGAGGTACGTAATTTGCAGAGCGATAAGGAAGCCAAGAATCCTGCTCCTAATTTGGAGCCCACCCGACAACTTCATAGGAGGAATTGGGCTCTTTTCGAGCACTTGATCCCGAGTCATGTTCATGATAAAATTACCGTTGTTCGGCCGCCTGCTGATTTGCTGGTCAAGGACAAAGTAGCGTGGAAGCATTCTCAGGATGGAAGCTTTAGTGTTCGCTCTGCTTATCAACACATCACGGGTTTGCAGGATAATGAGGATGCAGCTTTCTGGAGAAAGTTGTGGCAGTTCGTGATTGCAAGTATGCAAAGAATATTTGGATGCGGCTTGTTAAACCCAGGTATTGGCCTCTATTTTTTAACACTGATTTGCAATTTGAGTATGCATATGGGATGCTTGGAGTTGGATTGGCAAACTTCTTTTGCTACGGCTTGCTGGTCCATTTGGCGGTGGAGAAACGAGGAAATTTTCGGCAATGGTTTTACTTGTGCGGACCCTTATTTCATGGTGATTCAGAGAACCCGTGCTTCCCTTGAAGCCTTTGATTCGGCCATTGTCAAAAGTGGTAATCATATCAGTAGGGTCAATAGAGTTGTTCGGTGGGAGAAACCTGAGTTTGGGTGGGTTAAAGTGAATGTGGATGGTGCCTGTACCAGAGATGATGCTGAGAGAGCTGCTTGTGGTGGAGTAATTCGGGATGCGCATGGTAGGTGCTTGGTTGGTTTCACTAGACGTCTTGGCAGTTGCTCGAGCATTCATGCTGAACTCTGGGGTGTGCTTTCGGGATTAGAAACTGCTATTCGGTATGGTTTTAATCGTGTCTTGCTCGAGATGGATTCATTAGTTGCGTATGAGCTGATCAGGAATACCATCATCGACACTCATCCGTGCGCCAGCATCATTCAAAGTATCCAAACCCGGAGTAGAGACTTTGATGAGGTGATTTTTAAGCATGTCTATAGAGAAGGCAACCAAGCTGCGGATATGATGGCTGCGTGGGCTCACGATGCTGAAAGGAGTTTGTGCTTTCTGGAGAACATTCCTGCTGCTATAGCTAGTATCTTAGAGGAGGATCTTAGAGGTGTTGGTGTTTTGAGAGCTTGTGTGagctaa 2091 0.4371 MGLSSPTLVSAMTDLTPAFTYIFAVASRMENLDLRVRSSQAKCVGTVVSIIGALVVTLYRGLPITILPQQSGNLLSHQPNWLLGGILLALSSVFISLLNIVQTWILKDYPTELMALFHAFIIVMNGWACRKKGPVYVAIFSPLGIVIALCMGIVMIGCVIIAIGFYGVIWGIAQERKKMVNHNNNEISTYVSSSTPLLYNKSIDTYIETERAAEAEAEKSTVTEPSVICNGETVVTTQGETVHEAPANDGKAERGDDDELGNSEKFRPWNLANRKARRKGGNYKRVDQGGNQGSGKNVLASQRANNGNQSRFNVLRDAEEILEVNMDEVRNLQSDKEAKNPAPNLEPTRQLHRRNWALFEHLIPSHVHDKITVVRPPADLLVKDKVAWKHSQDGSFSVRSAYQHITGLQDNEDAAFWRKLWQFVIASMQRIFGCGLLNPGIGLYFLTLICNLSMHMGCLELDWQTSFATACWSIWRWRNEEIFGNGFTCADPYFMVIQRTRASLEAFDSAIVKSGNHISRVNRVVRWEKPEFGWVKVNVDGACTRDDAERAACGGVIRDAHGRCLVGFTRRLGSCSSIHAELWGVLSGLETAIRYGFNRVLLEMDSLVAYELIRNTIIDTHPCASIIQSIQTRSRDFDEVIFKHVYREGNQAADMMAAWAHDAERSLCFLENIPAAIASILEEDLRGVGVLRACVS 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1855 696 PANTHER WAT1-RELATED PROTEIN 2 117 IPR030184 GO:0016021|GO:0022857
Sto13g1855 696 PANTHER WAT1-RELATED PROTEIN 123 174 IPR030184 GO:0016021|GO:0022857
Sto13g1855 696 MobiDBLite consensus disorder prediction 246 264 - -
Sto13g1855 696 Coils Coil 315 335 - -
Sto13g1855 696 CDD RNase_H_like 537 657 IPR044730 -
Sto13g1855 696 SUPERFAMILY Ribonuclease H-like 533 662 IPR012337 -
Sto13g1855 696 Pfam Reverse transcriptase-like 538 660 IPR002156 GO:0003676|GO:0004523
Sto13g1855 696 PANTHER WAT1-RELATED PROTEIN 2 117 - -
Sto13g1855 696 PANTHER WAT1-RELATED PROTEIN 123 174 - -
Sto13g1855 696 MobiDBLite consensus disorder prediction 238 264 - -
Sto13g1855 696 MobiDBLite consensus disorder prediction 277 297 - -
Sto13g1855 696 Gene3D - 533 663 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1855 Sto-Chr13 25955263 25968820 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1855 4 175 Nodulin-like Gene Family AT3G28050 39.912 3.75e-34 132