Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1854 ATGGCGGCGATGGTGATAGTAATAGTGAGAGCaaaccaagaagaagaagaagaagccgaTAGGATTGTGGAGCTCCCAGGGCAGCCAACGGTGTCGTTTCGCCAGTTCTCAGGCTATGTTACCGTGAATCGCGTCGCAGGAAGAGCCCTCTTTTATTGGCTCACCGAAGCCACTCAAAACCCCTTCCGTAAGCCGCTTCTCATTTGGCTCAACGGaggtccgGGATGTTCATCCGTGGCATATGGAGCATCCGAGGAAATTGGACCATTCAGAATAAACAAGACGGCTTCAGGGCTATACCTTAACAAGTTCTCGTGGAACACCGTGGCCAACCTTCTGTTCTTGGAAGCTCCGGCCGGCGTCGGCTTCTCCTACTCCAACCGCTCCTCCGACCTCCTCGACACCGGCGACCGCCGCACTGCGAAAGACTCTCTGGAATTCGTAATCCGATGGCTAGAACGATTCCCACGTTACAAGAATCGTGAGCTTTACATAAGCGGAGAGAGCTACGCAGGCCATTATGTTCCTCAATTAGCTCAGCAAATCATTATGTACAATGCTAAAGCCAAGCACCCCATCAACCTTAAGGGCATAATGGTTGGGAATGCGGTGACAGACAACTACTACGATAACTTGGGAACGGTGACGTATTGGTGGAGCCACGCGATGATCTCCGATCAGACTTACCGGCAGCTGATGAGCACGTGCGATTTTCACCGGCAAAAGGAATCCGATGAGTGCGAGTCGCTGTATAGTTATGCCATGGATCAGGAATTTGGGAACATTGATCAGTACAACATCTACGCGCCTCCGTGCAACAACTCCGATGGCAGCGCCGCCGCCACCCGCCGCTCCATGCGCCTCCCCCACCGCCCTCGTCACCCGAGCTTGAGGCAAATGGCTGGGTATGACCCCTGCACTGAGAAGTATGCAGAGATATACTACAATAGGCCAGACGTTCAAAAAGCACTTCATGCTAACACAACCACCATTTCCTACAAATGGACTGCTTGCAGTGAGGTGCTGAATCgaaattggaatgacacagacGTATCTGTGCTCCCAATTTATAGAGAGTTGATGGCACATGGAATGAGAGTTTGGGTTTTCAGtGGGGACGTTGATTCAGTGGTGCCAGTAACAGCAACGAGGTATTCTCTTGCACAGCTGAAGTTGGCAACCAAAATCCCATGGTACCCTTGGTATGTCAAGAATCAGgttGGAGGATGGACAGAGGTATATGAAGGGCTAACCTTTGCTACAGTAAGAGGAGCAGGACATGAAGTGCCATTATTCAAGCCCAGAGCAGCCCTTCAGTTATTCAAATCATTCATTGCAGGAAAACCTCTTCCCAAGTCCTAG 1362 0.489 MAAMVIVIVRANQEEEEEADRIVELPGQPTVSFRQFSGYVTVNRVAGRALFYWLTEATQNPFRKPLLIWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKFSWNTVANLLFLEAPAGVGFSYSNRSSDLLDTGDRRTAKDSLEFVIRWLERFPRYKNRELYISGESYAGHYVPQLAQQIIMYNAKAKHPINLKGIMVGNAVTDNYYDNLGTVTYWWSHAMISDQTYRQLMSTCDFHRQKESDECESLYSYAMDQEFGNIDQYNIYAPPCNNSDGSAAATRRSMRLPHRPRHPSLRQMAGYDPCTEKYAEIYYNRPDVQKALHANTTTISYKWTACSEVLNRNWNDTDVSVLPIYRELMAHGMRVWVFSGDVDSVVPVTATRYSLAQLKLATKIPWYPWYVKNQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFKSFIAGKPLPKS 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1854 453 Gene3D - 306 343 - -
Sto13g1854 453 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 10 452 IPR001563 GO:0004185|GO:0006508
Sto13g1854 453 SUPERFAMILY alpha/beta-Hydrolases 18 451 IPR029058 -
Sto13g1854 453 ProSitePatterns Serine carboxypeptidases, serine active site. 165 172 IPR018202 GO:0004185
Sto13g1854 453 Gene3D alpha/beta hydrolase 16 274 IPR029058 -
Sto13g1854 453 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 25 10 452 - -
Sto13g1854 453 ProSitePatterns Serine carboxypeptidases, histidine active site. 417 434 IPR033124 GO:0004185
Sto13g1854 453 Pfam Serine carboxypeptidase 26 446 IPR001563 GO:0004185|GO:0006508
Sto13g1854 453 Gene3D - 353 447 - -
Sto13g1854 453 PRINTS Carboxypeptidase C serine protease (S10) family signature 102 114 IPR001563 GO:0004185|GO:0006508
Sto13g1854 453 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 125 IPR001563 GO:0004185|GO:0006508
Sto13g1854 453 PRINTS Carboxypeptidase C serine protease (S10) family signature 151 176 IPR001563 GO:0004185|GO:0006508
Sto13g1854 453 PRINTS Carboxypeptidase C serine protease (S10) family signature 417 430 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1854 Sto-Chr13 25920268 25929447 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1854 311 450 Calmodulin-binding Proteins AT2G22960 31.915 3.34e-17 77.8