Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1852 ATGGCATTCATCAACAAGATTGGAAAGCTTCTCAAGCAATCTGCTGTCAAGCACATTAACCTAGAATTTTCTGCATCGACTCCATCAATTTACCAGGCAATCAGGTCCATGTCATCTGCAAGGGTTTTTGTTGGAGGTGTTTCGTATAGCACAGATGAAATGAGTCTGAGAGAAGCCTTCGCTCGCTATGGAGAAGTAATTGACGCAAGGATAATAATGGATCGTGAGACTGGTAGGTCCAGAGGTTTTGGCTTTGTAACTTTTACATCAACTGAGGAAGCATCTTCTGCTATTCAGGCATTGGATGGCCAGGATCTTCATGGTCGGAGGATACGGGTAAACTTTGCTACAGAAAGGGCACGCCCAGGGTTTGGTGGTGGAGGCGGCGGCTTTTatggtggcggcggcggcggcggcggcagtGGCGGCTATGCTAGAAGTAATTATGGAGGTGATGATAGCTACAGGAGTCCAAGTTATGGAAGCAGTGGTGGTGGTTTCAGGAGCGGTGGAAATTATGGTGCTCCTGAAGGTGCTGGTGGTGGCAATTACCAATTCAATGAAAACTCTGGTGGTGATCAGGGCTTTGCTAGCAGTGAGCTCAGTAGCAATTCTGCTTTGGGGGATGATGAAGGCCAATTTGGTAGCAACCAAAATGAAGAAACAGGCATAGATAATGAAGACAGTTTCAAAGATAACAATGATGAAGACGATTTGAAAGAGACCCGGCAATGA 735 0.4367 MAFINKIGKLLKQSAVKHINLEFSASTPSIYQAIRSMSSARVFVGGVSYSTDEMSLREAFARYGEVIDARIIMDRETGRSRGFGFVTFTSTEEASSAIQALDGQDLHGRRIRVNFATERARPGFGGGGGGFYGGGGGGGGSGGYARSNYGGDDSYRSPSYGSSGGGFRSGGNYGAPEGAGGGNYQFNENSGGDQGFASSELSSNSALGDDEGQFGSNQNEETGIDNEDSFKDNNDEDDLKETRQ 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1852 244 SUPERFAMILY RNA-binding domain, RBD 25 149 IPR035979 GO:0003676
Sto13g1852 244 MobiDBLite consensus disorder prediction 171 244 - -
Sto13g1852 244 Gene3D - 31 156 IPR012677 -
Sto13g1852 244 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3, MITOCHONDRIAL 1 234 - -
Sto13g1852 244 SMART rrm1_1 41 114 IPR000504 GO:0003723
Sto13g1852 244 MobiDBLite consensus disorder prediction 224 244 - -
Sto13g1852 244 CDD RRM_HP0827_like 41 116 - -
Sto13g1852 244 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 40 118 IPR000504 GO:0003723
Sto13g1852 244 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 42 112 IPR000504 GO:0003723
Sto13g1852 244 MobiDBLite consensus disorder prediction 183 223 - -
Sto13g1852 244 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 1 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1852 Sto-Chr13 25901811 25903584 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1852 33 126 C2H2 Transcription Factor Family AT2G19380 32.979 6.64e-12 63.2