Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1833 ATGGCCACTTCAAGAACCGTCAAGGACGTTTCGCCTCACGAGTTCGTTAAGGCTTACTCCGCTCACCTCAAGCGTTCAGGCAAGATGGAGCTTCCTGAGTGGACGGACATTGTAAAAACTGCAAGATTTAAAGAACTGGCTCCATATGATCCTGACTGGTATTATGTTAGAGCTGCCTCCATCGCTAGAAAGATCTACTTGAGAGGTGGCCTTGGTGTTGGTGCTTTTCAGAGGATCTATGGTGGAAGCAAGAGGAATGGAAGCCGTCCCCCGCATTTCTGCAAGAGCAGTGGAGCTATTGCCAGAAACATTCTTCAACAACTGCAAAACATGAACATTATTGATATTGATCCAAAAGGAGGAAGGAGAATCACTTCTAGTGGTCAAAGGGATCTTGATCAAGTTGCTGGGCGAATTGTGGTTCCTTGA 429 0.4639 MATSRTVKDVSPHEFVKAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASIARKIYLRGGLGVGAFQRIYGGSKRNGSRPPHFCKSSGAIARNILQQLQNMNIIDIDPKGGRRITSSGQRDLDQVAGRIVVP 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1833 142 ProSitePatterns Ribosomal protein S19e signature. 90 109 IPR018277 GO:0003735|GO:0005840|GO:0006412
Sto13g1833 142 Pfam Ribosomal protein S19e 6 140 IPR001266 GO:0003735|GO:0005840|GO:0006412
Sto13g1833 142 PANTHER 40S RIBOSOMAL PROTEIN S19 3 141 IPR001266 GO:0003735|GO:0005840|GO:0006412
Sto13g1833 142 Gene3D - 1 141 IPR036388 -
Sto13g1833 142 SUPERFAMILY "Winged helix" DNA-binding domain 6 140 IPR036390 -
Sto13g1833 142 PANTHER 40S RIBOSOMAL PROTEIN S19-3 3 141 - -
Sto13g1833 142 SMART Ribosomal_S19e_2 6 142 IPR001266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1833 Sto-Chr13 25704380 25705936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1833 1 139 Cytoplasmic Ribosomal Protein Gene Family AT5G61170 85.612 1.70e-91 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1833 K02966 - gmx:100499800 273.863