Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1814 ATGCCTactctcttctctctccctAGGTGCTTGGAAAAGAATTCTCAGAGTAGCAGCGGCGGAGAGAGTAGTCCCGACGTCGTCGCCGTCGCGGACGACAATCCAGGCTTCAACTCCTCCGCCGTCGAGTGCTACGCCTGCACTCAGGTAGGCGTGCCGGTATTCCACTCCACGAGCTGCGACAGCTGTCATCCGCCGCAATGGGAGGCATCGGCGGGATCCTCGCTGATCCCGATCCAGAGCAGAGCCGCCGGCGGGAAGGCGGCGCCGAGCCGGCCGAAGCCGGGGCGGCTCGGGCGGGGGGTGGTGGATCCGAGGAGCAAGGAGGTGCAGAGGTGGAACAGGGCGCTGCTGCTGGCGCGTGGGATGGCTCTGGCGGTGGATCCGCTGTTCTTCTACGCGCTGTCGATCGGGAGGGAGGGGACGCCGTGCCTGTACATGGACGGGGGATTGGCGGCGGTAGTGACGGTGCTGAGGACGTGCGTGGACGCTGTGCACGTGTGCCACGTGTGGCTGCAGTTCAGGACGGCGTACGTGTCGAAGGAGTCGATGGTGGTTGGGTGCGGGAAGCTGGTGTGGGACGCGCGTGCCATAGCGGCGCATTACTTGAGGTCCATGAGGGGCTTCTGGTTCGACGCCTTCGTCATTCTTCCCGTTCCTCAGGCAGTGTTTTGGTTCATACTCCCAAAACTGATTAGAGAAGAGCGAATCAAAATCATAATGACCCTACTCCTATTAATCTTCTTGTTTCAATTTCTTCCCAAAGTCTACCACAGCATCTGCATGATGAGGAAAATGCAGAAAGTCACAGGCTATATCTTCGGCACCATTTGGTGGGGCTTCGGCCTCAATCTCATAGCCTACTTCATTGCCTCTCATGTTGCTGGAGGGTGCTGGTATGTGCTGGCAATCCAACGTGTTGCGTCATGCCTGAGGCAGCGATGTGAGAGAGGCTTTGGATGCGATTTGCCTTTGTCATGCTCAGAGGAGGTATGCTACAAGTTTCTGTCAACTGGTGCTGTTGGCAGTTCGTGTAGTGGAAACTTCACAGTAGTGAGGAAGCCATTGTGTTTAGATGGTCAAGGGCCTTTCAAATATGGGATATACCAATGGGCTCTTCCTGTCATTTCCAGCAACTCTTTGGCTGTTAAGATTCTTTATCCCATATTTTGGGGTTTGATGACCCTCAGCACCTTTGGGAATGATCTTGAGCCCACGAGTCACTGGCAAGAAGTGATGTTCAGCATATGCATCGTACTCAGTGGACTACTGCTCTTCACTCTGTTGATTGGGAACATCCAGGTATTCTTACACGCAGTGAtggcaaagaaaagaaaaatgcagcTGAGATGTCGTGACATGGAGTGGTGGATGAGGAGGAGGCAGCTTCCGTCGCGTTTAAGACAGAGAGTTCGACAGTTTGAGAGACAGAGGTGGGCAGCCATGGGAGGAGAGGACGAAATGGAAATGATCAAGGACTTGCCTGAAGGGTTGAGGAGGGACATCAAACGCTATCTTTGCCTAGACCTCATCAAGAAGGTGCCTCTGTTTCACAATCTGGATGATCTCATTCTTGACAACATATGTGATAGGGTTAAACCATTGGTCTTCTCTAAAGAAGAAAAGATAATCAGAGAAGGTGACCCAGTCCCAAGAATGGTGTTCATAGTTCGTGGGCGTATAAAACGCAACCAAAGCCTAAGCAAAGGCATGGTAGCCACAAGCATGTTGGAAGCAGGAGGCTTTCTGGGTGATGAGCTTCTCTCATGGTGTCTCAGGCGGCCATTCATGGATCGTCTTCCAGCATCCTCAGCCACATTCATCTGTGTAGAATCAACCGAAGCCTTCGGCTTGGACGCGGATCACCTGAAGTACATCACCGATCACTTCCGGTACAAGTTCGCGAATGAGAGGCTGAAGAGAACGGCCAGATATTACTCCTCCAATTGGAGGACATGGGCTGCTGTGAATATACAGTTTGCTTGGCGACGTTACAGGCAGAGGACCAGAGGTCCCATGAACCTTGtaatggagagtggagaagagaGTGCTGAGCGCAGGCTCCTGCAGTATGCTGCTATGTTCATGTCAATAAGGCCACATGACCACCTTGaatga 2118 0.5165 MPTLFSLPRCLEKNSQSSSGGESSPDVVAVADDNPGFNSSAVECYACTQVGVPVFHSTSCDSCHPPQWEASAGSSLIPIQSRAAGGKAAPSRPKPGRLGRGVVDPRSKEVQRWNRALLLARGMALAVDPLFFYALSIGREGTPCLYMDGGLAAVVTVLRTCVDAVHVCHVWLQFRTAYVSKESMVVGCGKLVWDARAIAAHYLRSMRGFWFDAFVILPVPQAVFWFILPKLIREERIKIIMTLLLLIFLFQFLPKVYHSICMMRKMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLRQRCERGFGCDLPLSCSEEVCYKFLSTGAVGSSCSGNFTVVRKPLCLDGQGPFKYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSHWQEVMFSICIVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSRLRQRVRQFERQRWAAMGGEDEMEMIKDLPEGLRRDIKRYLCLDLIKKVPLFHNLDDLILDNICDRVKPLVFSKEEKIIREGDPVPRMVFIVRGRIKRNQSLSKGMVATSMLEAGGFLGDELLSWCLRRPFMDRLPASSATFICVESTEAFGLDADHLKYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRQRTRGPMNLVMESGEESAERRLLQYAAMFMSIRPHDHLE 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1814 705 ProSiteProfiles Cytochrome c family profile. 46 138 IPR009056 GO:0009055|GO:0020037
Sto13g1814 705 Gene3D - 142 439 - -
Sto13g1814 705 Gene3D Jelly Rolls 514 632 IPR014710 -
Sto13g1814 705 Gene3D Helix hairpin bin 442 507 - -
Sto13g1814 705 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 45 705 - -
Sto13g1814 705 ProSiteProfiles cAMP/cGMP binding motif profile. 516 595 IPR000595 -
Sto13g1814 705 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2-LIKE 45 705 - -
Sto13g1814 705 Pfam Ion transport protein 113 434 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Sto13g1814 705 SUPERFAMILY Voltage-gated potassium channels 104 437 - -
Sto13g1814 705 CDD CAP_ED 516 623 IPR000595 -
Sto13g1814 705 SUPERFAMILY cAMP-binding domain-like 443 630 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1814 Sto-Chr13 25509556 25515521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1814 40 705 Ion Channels AT5G15410 77.647 0.0 1026
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1814 K05391 - gmx:100798823 1146.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g1814 13 25509556 25515521 Sto13g1814 13 25509556 25515521 ECH