Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1806 ATGCCTACCATAAACGCCGATTCCGCCACGGCGGCGCCGCCGCGCCCCACCATTACTCTCCCGCCGCGCCCTTCTATGGAGGCCTTCTTCTACGGCGCACCCGGCGCAAGCCCTGGCCCCATGACCCTCGTCTCCAGCTTCTTCTCCGACAACTACCCCGATTCCGACTGTCGGTCCTTCTCCCAGCTGCTCGCCGGAGCTATGGCTTCTCCGCTCGCCGCCGTCGGCGCCAGGCCGAGCTTCTTTCCGGACAATCCGACCGACAATTCGGCGAAAGAAGTGGGTGCTGAGGATGGAGCGCAGAAGAATTTGGGGTTCAAGCAGAGTAGGCCGATGAATCTGGTGATTGCTCGATCGCCATTATTTACTGTTCCTCCTGGGCTAAGCCCTTCTGGGTTGCTTAACTCGCCGGGTTTCTTTCCGCCGCAGAGCCCCTTTGGGATATCTCACCAGCAGGCTTTAGCACAGGTTCAAGCTCAAGCTGTCTTAGCACAATCTCATATGCACATGCCATCTAATCATCAACAATCTGCGGTTTCAGCTCCTGGGGAACCATTAGCAGAGCAAACATCCTTTATTTCAAGTGAAACTTCAGAGCAGCAAGTGGCACCATCTGCATCAGATCCTAGAAGTGCCCAAATGGAGACTTCAGATATTTCTCTTGCTGATAAGAAATATCAACAGCCTTCATTGGCCATTGATAAACCTGCAGATGACGGCTACAACTGGCGTAAGTATGGGCAGAAGCAGGTTAAGGGAAGTGAGTATCCAAGGAGCTACTACAAGTGTACACATCTGAATTGCCCAGTAAAGAAAAAGGTTGAACGTGCACCTGACGGTCACATTACTGAAATTATCTATAAAGGCCAACATAATCATGAAGTACCTCAGCCAAACAGGCGCATTAAAGATAACACTGATTTAAATGGAAATTCAAGCATTCAAGTTAAGTCGGACTCAACAGCACAAGGTTGGGTTGGAAAAGCAAACAAGTTCAGTGAAAGCATGCCCAATCATTCAGTTCCTGAGAGTGATCTGAGATCCAATCAAGGTGCTCACAGGCAACTACCTGGATCAAGTGAGAGTGAGGAAGCAGGTGATGAAGATATTAGGGAAGAGGAGGGAGATGCTAGTGAGCCAAATGCTAAGAGAAGGCACGTTTCACCTCTACCTATGTCTCACAAAACTGTCACAGAACCCAAAATCATTGTGCAAACAAGAAGCGAAGTTGATCTTCTGGATGATGGCTATAGGTGGCGCAAGTATGGGCAAAAAGTAGTTAAAGGAAATCCTCATCCCAGGAGTTATTACAAATGCACTAGTGCAGGATGCAATGTGCGTAAGCATGTCGAGAGAGCTTCAACGGACCCCAAGGCTGTCATCACTACCTATGAGGGAAAACATAACCATGATGTGCCTGCTGCTAGAAGCAGCAGCCACAACACTGCTACTACCACTTCAATGCCATTAAAACCACATAAAGTGGTGCCTGAAAAGCATCCTTTGCTTAAAGATATGGATTTTGGAAATAATGACCAACGACCGGTTGCTTTACGCTTAAAAGAAGAGCAAATCATAGTATAG 1584 0.4842 MPTINADSATAAPPRPTITLPPRPSMEAFFYGAPGASPGPMTLVSSFFSDNYPDSDCRSFSQLLAGAMASPLAAVGARPSFFPDNPTDNSAKEVGAEDGAQKNLGFKQSRPMNLVIARSPLFTVPPGLSPSGLLNSPGFFPPQSPFGISHQQALAQVQAQAVLAQSHMHMPSNHQQSAVSAPGEPLAEQTSFISSETSEQQVAPSASDPRSAQMETSDISLADKKYQQPSLAIDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCPVKKKVERAPDGHITEIIYKGQHNHEVPQPNRRIKDNTDLNGNSSIQVKSDSTAQGWVGKANKFSESMPNHSVPESDLRSNQGAHRQLPGSSESEEAGDEDIREEEGDASEPNAKRRHVSPLPMSHKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHDVPAARSSSHNTATTTSMPLKPHKVVPEKHPLLKDMDFGNNDQRPVALRLKEEQIIV 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1806 527 MobiDBLite consensus disorder prediction 167 224 - -
Sto13g1806 527 MobiDBLite consensus disorder prediction 475 489 - -
Sto13g1806 527 ProSiteProfiles WRKY domain profile. 408 473 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto13g1806 527 SUPERFAMILY WRKY DNA-binding domain 236 296 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto13g1806 527 MobiDBLite consensus disorder prediction 1 20 - -
Sto13g1806 527 SMART WRKY_cls 413 472 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto13g1806 527 SMART WRKY_cls 237 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto13g1806 527 Pfam WRKY DNA -binding domain 414 470 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto13g1806 527 Pfam WRKY DNA -binding domain 238 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto13g1806 527 Gene3D WRKY domain 224 297 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto13g1806 527 Gene3D WRKY domain 398 474 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto13g1806 527 PANTHER WRKY TRANSCRIPTION FACTOR 73 10 525 - -
Sto13g1806 527 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 10 525 IPR044810 GO:0003700
Sto13g1806 527 SUPERFAMILY WRKY DNA-binding domain 405 473 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto13g1806 527 MobiDBLite consensus disorder prediction 302 357 - -
Sto13g1806 527 MobiDBLite consensus disorder prediction 289 389 - -
Sto13g1806 527 MobiDBLite consensus disorder prediction 470 493 - -
Sto13g1806 527 MobiDBLite consensus disorder prediction 167 241 - -
Sto13g1806 527 ProSiteProfiles WRKY domain profile. 232 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1806 Sto-Chr13 25456578 25460683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1806 15 525 WRKY Transcription Factor Family AT2G03340 52.720 1.90e-147 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto13g1806 WRKY 1.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1806 - - gmx:100796679 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g1806 13 25456578 25460683 Sto13g1806 13 25456578 25460683 ECH