Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1802 ATGGGTTGCATTAACTCCAAGAGGTTGGTCGCCGGAGTTTCGCCCGCGCACGGCTCGGCGGCGCGTGGTCGTGCGCGCGCCGAACACGATGGGTCCGCGGTTGTGGAGCCTCCGGCGTCGCGATTTCAATCGGAGGTGTTGGGTTCTGAGAAGAAAGGGGATGGGAAATCGGAGGATCGGAATCGAGATGGGAAGAAGTCGAAGAGTAATAATAGCTCTACCAAAGGAAGCAGCGGGAGGTTCAGTTTCAAGATGAAGCTCTCCCGAAGATTGGTGGAAGCGGAGCAGAATGCGGCTGGATGGCCCCCTTGGCTCACCTCTGCTGCAGGGGAAGCTGTTCATGGATGGGTGCCCCTCAGAGCAGATTCCTTTGAGAAATTAGACAAGATTGGTCAAGGTACATATAGCAGTGTGTTCAAAGCACGAGAAGTTGCAACTGGGAAGATGTTTGCACTGAAGAAGGTGCGATTTGACAATTTTCAACCCGAGAGCGTCAGGTTCATGTCAAGAGAAATATCAATTCTTCGCAGGCTTGACCATCCAAACATCATGAAATTGGAGGGTTTAATCACCTCCCGAGTATCAAATAGCATATACCTTGTGTTTGAATATATGGATCATGATCTTGCAGGACTTGTGTCTTGTCCTGACATCAAGTTCAGCGAAGCCCAGATTAAATGTTACATGAGGCAGCTATTGAGTGGAATGGAGCATTGTCACGTACGTGGTGTCATGCATCGAGACATTAAAGTATCCAATATATTAGTGAGTAGTGACGGTATTCTCAAGATAGGCGATTTTGGATTAGCAAATACAATTAGCCCAGGAAACAGACATCCATTAACCAGTCGTGTAGTGACACTATGGTATCGTCCTCCTGAACTCTTGATGGGGGCGACCCATTATGGAGTATCTGTGGATCTCTGGAGTGTGGGCTGTGTATTTGCCGAACTATTTTTGGGGAAGCCTATCCTCAAGGGGAGAACTGAGGTCGAACAATTACACAAAATTTTCAAGCTTTGTGGTTCTCCTCCTGACGAGTTCTGGAAAAAGTGTAAGCTTCCTCATGCAACTATGTTCAAACCTCAGACTACTTATGAAAGCTCTTTTAGGGAGAGGTGTCAAGATTTTCCACCATCTGCTGTAAGCCTAATGGAGACTTTACTATCCATTGACCCCAATAACCGTGGGACTGCCTCTTCTGCCTTAATGTCTGAGTATTTCAGCACCAAGCCATATGCTTGTGATCCGTCAACCTTGCCAAAATATCAACCCAACAAAGAAATGGATGCTAAAAATCGGGATGATTCCCGAAGGTAA 1320 0.4705 MGCINSKRLVAGVSPAHGSAARGRARAEHDGSAVVEPPASRFQSEVLGSEKKGDGKSEDRNRDGKKSKSNNSSTKGSSGRFSFKMKLSRRLVEAEQNAAGWPPWLTSAAGEAVHGWVPLRADSFEKLDKIGQGTYSSVFKAREVATGKMFALKKVRFDNFQPESVRFMSREISILRRLDHPNIMKLEGLITSRVSNSIYLVFEYMDHDLAGLVSCPDIKFSEAQIKCYMRQLLSGMEHCHVRGVMHRDIKVSNILVSSDGILKIGDFGLANTISPGNRHPLTSRVVTLWYRPPELLMGATHYGVSVDLWSVGCVFAELFLGKPILKGRTEVEQLHKIFKLCGSPPDEFWKKCKLPHATMFKPQTTYESSFRERCQDFPPSAVSLMETLLSIDPNNRGTASSALMSEYFSTKPYACDPSTLPKYQPNKEMDAKNRDDSRR 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1802 439 Gene3D Transferase(Phosphotransferase) domain 1 207 439 - -
Sto13g1802 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Sto13g1802 439 SMART serkin_6 124 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g1802 439 ProSitePatterns Protein kinases ATP-binding region signature. 130 153 IPR017441 GO:0005524
Sto13g1802 439 ProSiteProfiles Protein kinase domain profile. 124 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g1802 439 PANTHER CYCLIN-DEPENDENT KINASE 51 439 - -
Sto13g1802 439 CDD STKc_CDK9_like 124 408 - -
Sto13g1802 439 SUPERFAMILY Protein kinase-like (PK-like) 117 414 IPR011009 -
Sto13g1802 439 Pfam Protein kinase domain 124 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g1802 439 MobiDBLite consensus disorder prediction 416 439 - -
Sto13g1802 439 Gene3D Phosphorylase Kinase; domain 1 111 206 - -
Sto13g1802 439 MobiDBLite consensus disorder prediction 1 81 - -
Sto13g1802 439 PANTHER CELL DIVISION PROTEIN KINASE 51 439 - -
Sto13g1802 439 MobiDBLite consensus disorder prediction 47 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1802 Sto-Chr13 25427885 25432960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1802 116 439 Core Cell Cycle Gene Families AT5G10270 46.903 4.14e-108 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Sto13g1802 Pkinase 1.5e-69 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g1802 13 25427885 25432960 Sto13g1802 13 25427885 25432960 ECH
Sto8g2786 8 20093441 20098215 Sto13g1802 13 25427885 25432960 ECH