Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1777 ATGCATGGGGACGAAGACGAACAGGGGAGGGAGAGAGATGATTTGGGAACCAAATTAGGGTTCTCTGTGCATTGGATGACATTTGAATTGGGAGCAAAATTAGTATTGATGGTGCTTGTGGCTTTCTTAAACGCAGGTGGCTCAATTCTCGCTCCAGTGAAAATAATAGCATTTCTGGAAATTACTGAAACTGCAATCCACAGAGATCAATGCCAATGGCGTATGGAAAAGAAGCTACCAcagtgtttagtgtttgttaCACTTTCTGATCCAATGGGTCGATCTCCATGCTGCGACAAGGTTGGCTTAAAGAAAGGACCATGGACACCTGAGGAAGATCAGAAACTCTTAGCTTATATTGAAGAGCACGGCCATGGAAGCTGGCGTGCCTTGCCTGCAAAAGCTGgactTCAGAGGTGTGGCAAGAGCTGCAGATTGAGATGGACCAATTATCTTAGGCCTGATATTAAGAGAGGAAAGTTCAGTTTGCAAGAAGAGCAAACCATCATTCAACTCCATGCCCTCTTGGGGAACAGGTGGTCGGCTATAGCCACTCACTTGCCTAAAAGAACAGATAATGAGATCAAGAACTACTGGAACACGCATCTTAAGAAAAGGTTAGCCAAAATGGGGATTGACCCTGTGACCCACAAGCCCAAGAATGATGCACTTCTCTCCATTGATGGCCAATCCAAGAGTGCAGCCAACCTTAGCCACATGGCTCAGTGGGAAAGTGCTAGGCTTGAAGCTGAAGCAAGATTGAGATACCACCACCCCCCTATATCCTCCTCACCATCTCTAGATGTACTCAAGGCTTTGAACAATGGTAGTGGTGGTGATCACCTTGAGTCCCCTTCCTCTTCCCTAACTTTCTCTGAGAACGCACCACCAATAATGTCTAGTGCAATGCCTATGATTGAGTTTGTGGGCACTTCAGGCTCTTCTGAGACAGGTATTGTGAAAGAGGAAGGTGAGCAAGAGTGGAAAGGTTATGGTATAGACAACAACTCTGTGTCTTTTGCTTCTAGCCTGCATGAGTTGACAATGTCCATGGATGGCACGTGGACTTCTGAGTCTCTTAGGACTACCTGCACTGATCATCATGCCATTGCTGAGGAAGGGTTCACAAATCTTTTGCTTAATACCAACTCCGATGACCGGAGCTTGTCGGAGGAGGGCGGAGGAGAGTCGAATAATTGCGATGGTAGTGGTGGCGGTGGCGGCAACGGCAGTGGTAGTGGAAGTGGAAGCGGAAGTGGGAGTGACTTCTATGAAGATAACAAGAACTACTGGAACAGTATTCTTAATTTAGTAAACTCTTCCCCTTCTGATTCTCCCATGTTCTGA 1347 0.4588 MHGDEDEQGRERDDLGTKLGFSVHWMTFELGAKLVLMVLVAFLNAGGSILAPVKIIAFLEITETAIHRDQCQWRMEKKLPQCLVFVTLSDPMGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLSIDGQSKSAANLSHMAQWESARLEAEARLRYHHPPISSSPSLDVLKALNNGSGGDHLESPSSSLTFSENAPPIMSSAMPMIEFVGTSGSSETGIVKEEGEQEWKGYGIDNNSVSFASSLHELTMSMDGTWTSESLRTTCTDHHAIAEEGFTNLLLNTNSDDRSLSEEGGGESNNCDGSGGGGGNGSGSGSGSGSGSDFYEDNKNYWNSILNLVNSSPSDSPMF 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1777 448 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 280 444 - -
Sto13g1777 448 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 92 261 - -
Sto13g1777 448 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 153 207 IPR017930 -
Sto13g1777 448 ProSiteProfiles Myb-like domain profile. 100 152 IPR001005 -
Sto13g1777 448 SMART sant 157 205 IPR001005 -
Sto13g1777 448 SMART sant 104 154 IPR001005 -
Sto13g1777 448 CDD SANT 107 152 IPR001005 -
Sto13g1777 448 MobiDBLite consensus disorder prediction 265 295 - -
Sto13g1777 448 Gene3D - 160 207 - -
Sto13g1777 448 Pfam Myb-like DNA-binding domain 105 152 IPR001005 -
Sto13g1777 448 Pfam Myb-like DNA-binding domain 158 203 IPR001005 -
Sto13g1777 448 Gene3D - 104 157 - -
Sto13g1777 448 MobiDBLite consensus disorder prediction 381 422 - -
Sto13g1777 448 CDD SANT 160 203 IPR001005 -
Sto13g1777 448 MobiDBLite consensus disorder prediction 279 295 - -
Sto13g1777 448 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 100 152 IPR017930 -
Sto13g1777 448 SUPERFAMILY Homeodomain-like 102 199 IPR009057 -
Sto13g1777 448 ProSiteProfiles Myb-like domain profile. 153 203 IPR001005 -
Sto13g1777 448 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 92 261 - -
Sto13g1777 448 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 280 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1777 Sto-Chr13 25200996 25207533 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1777 92 448 MYB Transcription Factor Family AT3G01140 53.266 1.13e-123 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto13g1777 Myb_DNA-binding 1.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1777 K09422 - pop:7482487 498.049