Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1756 ATGCTTCATTTTCACCTCAAGGCAGATCGAACTTGGGAGAGGATCAAATCGGAGAGAATTGTAGTAATTGGTAGAAATAATAAGATGAGGAAGCGTCAAGTGGTGGTGAGAAGAGAGGAAGTGGCAGTGATGAGGAGTGTGAGATACGGCGAGTGCCAGAAGAATCACGCGGCCAACGTCGGGGGATACGCGGTGGACGGGTGCCGGGAGTTCATGGCGAGCGGCAACGAGGGCACGTCGGCGGCTCTGACGTGCGCGGCGTGCGGCTGCCACCGGAGCTTCCACAAAAGAGAGGTGGATAATACTAATGAAGTTGTGTGTGAGTGCTCTTCATCTCCCTCCAATAATGGGAgtggttaa 360 0.525 MLHFHLKADRTWERIKSERIVVIGRNNKMRKRQVVVRREEVAVMRSVRYGECQKNHAANVGGYAVDGCREFMASGNEGTSAALTCAACGCHRSFHKREVDNTNEVVCECSSSPSNNGSG 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1756 119 PANTHER BNAA09G02420D PROTEIN 42 115 - -
Sto13g1756 119 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 49 98 IPR006456 -
Sto13g1756 119 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 42 115 - -
Sto13g1756 119 Pfam ZF-HD protein dimerisation region 47 99 IPR006456 -
Sto13g1756 119 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 48 99 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1756 Sto-Chr13 24980780 24982216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1756 29 115 Zinc finger-homeobox gene family AT3G28917 66.000 8.70e-39 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Sto13g1756 ZF-HD_dimer 7.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1756 - - dzi:111292097 136.346