Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1747 ATGGAGGAGAAGAATGAAATAACAATGGAGAGAATGGAAGATGTTATATTACCAGGTTTTCGGTTTCACCCCACAGACGAAGAGCTTGTGGATTTTTACCTGAAAAGGAAAATTCAGCAAAAGTCTCTTCCCATTGAGATTATCAAGCAAGTTGATATTTACAAGTACGACCCATGGGATCTTCCAAAAGAAACAGAGGTGGGAAGTAGTAGTGGTAGTGGGGAGAAAGAGGTGTATTTCTACTGCAAAAGAGATAGAAAGTACAGAAACAGTAGACGTCCGAATAGAGTGACGAAGGGTGGGTTCTGGAAGGCCACTGGGACAGACAGAGCCATATACTCGTCACAagggaataataataataagtgcaTTATTGGTCTCAAGAAGTCACTTGTCTTCTACAGAGGCAGAGCAGCTAGAGGCTTCAAAACTGACTGGATGATGCATGAGTTTCGCCTTCCTCCATCTCCTCCTTCTTCTCAATCTCATTCTCATGATTCACTCAACAAAACCCTCCCTCCAAATGAGTCATGGGCAATTTGCAGGATATACAAGAAAGCAAGCTCAATGTCCACCATGGCACACAAGGCTTTGTCTCACTCTCACCCATGGATCACTCACTTCCCAGAAAGCATGGTAGCTGATATACTCAATCATGGTGGTGGAGATTGCACTAATCATCACTTCAGCCCAGAAAACTTATCTTCCACTACAgaaaccaccaccaccaccagcagCAATGGCATTAATTTCTGTGCTTCAGAAGTTCCCATCATCATGAACCTGCAGAACAACAACCCAGTTGATCATGATGAGAGCTTCATCTTCCCCACAATGGATGAATCATCATCAAGCTCCATGCTTTTAATGAACACAGAGGAGTGTGCAGGATTTGGAAATAGTATGAACAGAGGAATTGGATTTCCCTTCACTTTGCCATGGGATTCCCCCTTCTTGTGA 960 0.4125 MEEKNEITMERMEDVILPGFRFHPTDEELVDFYLKRKIQQKSLPIEIIKQVDIYKYDPWDLPKETEVGSSSGSGEKEVYFYCKRDRKYRNSRRPNRVTKGGFWKATGTDRAIYSSQGNNNNKCIIGLKKSLVFYRGRAARGFKTDWMMHEFRLPPSPPSSQSHSHDSLNKTLPPNESWAICRIYKKASSMSTMAHKALSHSHPWITHFPESMVADILNHGGGDCTNHHFSPENLSSTTETTTTTSSNGINFCASEVPIIMNLQNNNPVDHDESFIFPTMDESSSSSMLLMNTEECAGFGNSMNRGIGFPFTLPWDSPFL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1747 319 PANTHER NAC DOMAIN-CONTAINING PROTEIN 94-RELATED 1 286 - -
Sto13g1747 319 SUPERFAMILY NAC domain 12 186 IPR036093 GO:0003677|GO:0006355
Sto13g1747 319 Pfam No apical meristem (NAM) protein 18 153 IPR003441 GO:0003677|GO:0006355
Sto13g1747 319 Gene3D NAC domain 25 191 IPR036093 GO:0003677|GO:0006355
Sto13g1747 319 ProSiteProfiles NAC domain profile. 16 186 IPR003441 GO:0003677|GO:0006355
Sto13g1747 319 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1747 Sto-Chr13 24891310 24894317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1747 1 266 NAC Transcription Factor Family AT5G39820 50.000 1.05e-83 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto13g1747 NAM 4.8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1747 - - gmx:100778120 291.197