Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1742 ATGGCGGAAGATACAGACCCCAAATCTGCTGCATCAGCATCATCATCATTGCCCGaggcagagaagaagaaggaacagAGTCTTCCCTTTTACCAGCTCTTCTCTTTCGCAGACAAGTATGACTATTTCCTCATGATCTCTGGGAGCTTAGGAGCCATCGTTCATGGCTCCTCCATGCCCGTCTTCTTCCTCCTTTTCGGTCAGATGGTCAATGGATTCGGCAAGAACCAGATGGATTTGAAGAAAATGACAGAGGAAGTATCGAAGTATGCTCTGTATTTTGTGTACCTCGGCCTCGTCGTTTGCGTATCATCCTACGCAGAAATTGCGTGCTGGATGTATAGTGGGGAGAGACAAGTGAGCACACTGAGGAAGAAGTACTTGGAGGCAGTTCTAAAACAGGACGTTGGGTTCTTCGATACAGATGCAAGAACAGGGGATATAGTTTTTAGTGTCTCCACTGATACTTTACTCGTTCAAGATGCCATTAGCgagaagGTGGGAAACTTCATACATTATCTGTCAACGTTTCTGGCTGGGTTGGTGGTTGGTTTTGTGTCGGCTTGGAGGTTGGCTCTTCTGAGTGTTGCTGTGATTCCTGGCATTGCTTTTGCTGGTGGCTTGTATGCTTATACCCTCACCGGGCTCACCTCCAAGAGCCGCGAATCCTACGCGAACGCCGGCATCATCGCCGAACAGGCGATTGCGCAAGTTCGAACGGTTTACTCGTATGTCGGAGAGAGTAAGGCTTTGAATTCTTATTCAGATGCCATACAAAACACACTGAAGTTAGGATACAAGGCAGGAATGGCCAAAGGTTTGGGATTAGGATGCACTTATGGGATAGCTTGCATGTCATGGGCACTAGTGTTTTGGAGTTTGGGACAGTCGTTTTCGAATCTAGGTGCTTTCAGTAAAGGAAAAGCAGCAGGATACAAACTGATGGAGATCATCAAGCAGAAACCCACCATAGTGGAGGACCCATCAGATGGGAAGTGCTTGAATGAGATTAATGGGAATATTGAGCTCAAGGATGTCACTTTCAGCTACCCCTCGAGGCCCGACGTGCTCATCTTTCGTAATTTCTCAATCTTTTTCCCGGCTGGCAAGACCGTCGCGGTCGTCGGTGGGAGCGGGTCGGGGAAGAGTACCGTTGTTTCATTGATTGAGAGGTTCTATGATCCTAATGAAGGTCAAGTTTTGTTGGATAATGTGGATATTAGGACACTGCAATTAAAATGGTTGCGCGATCAAATCGGGCTCGTGAATCAAGAACCCGCACTCTTCGCGACCACCATACTTGAGAATATACTCTATGGGAAGCATGATGCATCCATGGCAGAAGTAGAAGCTGCTGCTTCTGCTGCTAATGCTCATAGCTTCATTACCTTGCTTCCCAATGGCTATAACACTCAGGTAGGCGAGCGAGGAGTGCAGTTATCTGGGGGCCAAAAACAGAGAATTGCCATAGCCAGAGCAATGTTAAAAAACCCAAAGATCCTTCTTTTAGATGAAGCAACCAGTGCTCTTGATGCAGGCTCAGAGAGCATAGTCCAAGAAGCCCTAGACCGCCTCATGGTCGGCCGAACAACCGTCGTTGTAGCTCACCGGCTATCCACCATAAGGAATGTAGACAGCATTGCAGTTATACAACAAGGTCAAGTAGTGGAGACAGGAACACATGAAGAGCTGATTTCCAAGGCAGGAACCTACGCCTCGTTAATCCGGTTCCAAGAAATGGTTGGAAATAGAGACTTGTCCAACCCATCGACTCGCCGGACACGGTCCTCGCGGCTGAGCCACTCCCTCTCGACCAAGTCCCTGAGCCTCCGGTCCGGAAGCTTGAGGAACTTGAGCTACCAGTACAGCACAGGAGCCGATGGTCGAATCGAGATGATATCCAATGCCGAGACAGACAAGAAGAATCCTGCTCCTGAAGGGTATTTCCTACGGTTGCTGAAGCTGAATGCTCCCGAATGGCCTTATTCAATCATGGGAGCTATAGGGTCTGTTCTTTCTGGGTTTATAGGCCCAACTTTTGCCATTGTTATGAGCAATATGATTGAGGTGTTTTACTATAGAAATTATGCTTCCATGGAGAGGAAGACTAAGGAGTATGTGTTCATATATATTGGAGCTGGTCTTTATGCTGTGGGTGCTTATTTGATTCAGCATTACTTTTTTAGCATCATGGGAGAAAATCTCACCACAAGGGTTCGAAGAATGATGCTTGCTGCAATTCTGAGGAATGAAGTAGGATGGTTCGATGAGGATGAGCACAACTCAAGCTTAGTCTCTGCTCGCCTCGCTACTGATGCTGCCGATGTGAAATCCGCCATTGCTGAGAGGATCTCAGTGATACTGCAAAACATGACTTCTCTTCTCACTTCTTTCATTGTTGCTTTCGTTGTGGAATGGAGAGTCTCCTTGCTCATACTTGCAACCTTCCCTCTTCTTGTTCTTGCCAACTTTGCTCAGCAACTTTCTCTGAAGGGTTTTGCCGGAGACACAGCCAAGGCTCACGCAAAAACTAGCATGATCGCCGGAGAGGGTGTGAGCAACATCAGAACAGTGGCCGCATTCAACGCCCAAAACAAGATCATTTCCCTCTTCTGCCATGAGCTTCGGCTCCCCCAGCGTCGGAGCCTCCGTCGGAGCCAAACCGCCGGCCTCCTCTTCGGCCTCTCCCAGCTCGCCCTCTACGCCTCCGAAGCCCTCATCCTTTGGTACGGCGCACACCTCGTCAACAAAGGCGCCTCGACCTTCTCCAAAGTTATCAAAGTCTTCGTCGTCCTCGTCATCACCGCCAACTCCGTCGCCGAAACTGTCAGCCTCGCACCCGAAATAATCCGAGGCGGGGAAGCCGTGGGCTCCGTCTTCTCCATCCTCGACCGCCAAACTCGGATCGACCCGGATGACCCAGACGCCGACCCGGTTGAATCCCTTCGCGGAGAAATCGAACTCCGCCACGTGGATTTCTCCTACCCGTCCCGACCAGACGTAATGGTGTTCAAGGACTTTAACCTACGAATCAGAGCTGGGCAGAGTCAAGCCCTCGTGGGGGCAAGTGGGTCAGGAAAAAGCTCCGTAATTGCTCTAATCGAACGATTCTACGATCCCATCTCAGGAAAAGTCATGATTGATGGAAAAGACGTGAAAAGATTAAACTTGAAATCGCTAAGACTCAAAATCGGGTTAGTCCAACAAGAGCCTGCTCTGTTCGCAGCGACCATTTTCGAGAACATAGCATACGGAAAAGACGGCGAAACATCAGAGTCGGAAGTAACTGAAGTTGCACGCGCTGTGGGTGTGCATTCGTTTGTGAGTGGTTTGCCGGAGGGGTATAAGACTCCGGTGGGAGAAAGAGGGGTTCAGCTTTCGGGTGGGCAGAAACAGAGGATAGCCATAGCCAGAGCAATGCTTAAGGATCCTACGATCTTACTTCTTGATGAAGCAACTAGTGCACTTGATGCAGAATCGGAGTGTGTGCTTCAAGAGGCATTGGAGAGGCTGATGAGGGGTCGAACCACGGTGGTAGTGGCTCATAGGTTGTCGACCATAAGAGGGGTGGACTGTATCGGAGTGGTGCAGGATGGGCGGATTGTGGAACAAGGGAGCCATTCAGAGTTAGTGAGCCGATCGGAGGGTGCTTATTCTAGACTCTTGCAGTTGCAACATCATCATGTTTGA 3690 0.4902 MAEDTDPKSAASASSSLPEAEKKKEQSLPFYQLFSFADKYDYFLMISGSLGAIVHGSSMPVFFLLFGQMVNGFGKNQMDLKKMTEEVSKYALYFVYLGLVVCVSSYAEIACWMYSGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAWRLALLSVAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWSLGQSFSNLGAFSKGKAAGYKLMEIIKQKPTIVEDPSDGKCLNEINGNIELKDVTFSYPSRPDVLIFRNFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNEGQVLLDNVDIRTLQLKWLRDQIGLVNQEPALFATTILENILYGKHDASMAEVEAAASAANAHSFITLLPNGYNTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDSIAVIQQGQVVETGTHEELISKAGTYASLIRFQEMVGNRDLSNPSTRRTRSSRLSHSLSTKSLSLRSGSLRNLSYQYSTGADGRIEMISNAETDKKNPAPEGYFLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMSNMIEVFYYRNYASMERKTKEYVFIYIGAGLYAVGAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEDEHNSSLVSARLATDAADVKSAIAERISVILQNMTSLLTSFIVAFVVEWRVSLLILATFPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKIISLFCHELRLPQRRSLRRSQTAGLLFGLSQLALYASEALILWYGAHLVNKGASTFSKVIKVFVVLVITANSVAETVSLAPEIIRGGEAVGSVFSILDRQTRIDPDDPDADPVESLRGEIELRHVDFSYPSRPDVMVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPISGKVMIDGKDVKRLNLKSLRLKIGLVQQEPALFAATIFENIAYGKDGETSESEVTEVARAVGVHSFVSGLPEGYKTPVGERGVQLSGGQKQRIAIARAMLKDPTILLLDEATSALDAESECVLQEALERLMRGRTTVVVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELVSRSEGAYSRLLQLQHHHV 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1742 1229 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 664 951 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto13g1742 1229 CDD ABC_MTABC3_MDL1_MDL2 986 1225 - -
Sto13g1742 1229 MobiDBLite consensus disorder prediction 1 20 - -
Sto13g1742 1229 ProSitePatterns ABC transporters family signature. 1126 1140 IPR017871 GO:0005524
Sto13g1742 1229 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 21 294 IPR039421 -
Sto13g1742 1229 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 294 1227 IPR039421 -
Sto13g1742 1229 SMART AAA_5 368 560 IPR003593 -
Sto13g1742 1229 SMART AAA_5 1013 1200 IPR003593 -
Sto13g1742 1229 CDD ABC_6TM_Pgp_ABCB1_D1_like 45 314 - -
Sto13g1742 1229 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 48 292 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto13g1742 1229 PANTHER BNAA09G02390D PROTEIN 294 1227 - -
Sto13g1742 1229 PANTHER BNAA09G02390D PROTEIN 21 294 - -
Sto13g1742 1229 Gene3D ABC transporter type 1, transmembrane domain 612 974 IPR036640 GO:0005524|GO:0016021
Sto13g1742 1229 Gene3D ABC transporter type 1, transmembrane domain 23 300 IPR036640 GO:0005524|GO:0016021
Sto13g1742 1229 SUPERFAMILY ABC transporter transmembrane region 645 970 IPR036640 GO:0005524|GO:0016021
Sto13g1742 1229 CDD ABC_MTABC3_MDL1_MDL2 341 578 - -
Sto13g1742 1229 Pfam ABC transporter transmembrane region 50 296 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto13g1742 1229 Pfam ABC transporter transmembrane region 664 935 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto13g1742 1229 Pfam ABC transporter 1005 1154 IPR003439 GO:0005524
Sto13g1742 1229 Pfam ABC transporter 360 508 IPR003439 GO:0005524
Sto13g1742 1229 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 341 577 IPR003439 GO:0005524
Sto13g1742 1229 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 988 1223 IPR003439 GO:0005524
Sto13g1742 1229 SUPERFAMILY ABC transporter transmembrane region 33 328 IPR036640 GO:0005524|GO:0016021
Sto13g1742 1229 Gene3D - 976 1229 IPR027417 -
Sto13g1742 1229 Gene3D - 331 587 IPR027417 -
Sto13g1742 1229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 976 1225 IPR027417 -
Sto13g1742 1229 CDD ABC_6TM_Pgp_ABCB1_D2_like 653 969 - -
Sto13g1742 1229 ProSitePatterns ABC transporters family signature. 480 494 IPR017871 GO:0005524
Sto13g1742 1229 MobiDBLite consensus disorder prediction 585 605 - -
Sto13g1742 1229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 332 578 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1742 Sto-Chr13 24812789 24820888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1742 4 1225 Calmodulin-binding Proteins AT2G36910 52.756 0.0 1312
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g1742 13 24812789 24820888 Sto13g1742 13 24812789 24820888 ECH