Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1686 ATGTTCTGCTACCAAGAATCAAATCAAGACTCTAGTGCCGCTCAGGATCTTTGGAACCAAGATTTAGACCGGATCTTGATTcactgctctgataccatgttcaAGATGGCAAAAAATTCCCTGGATCTCAGAAATCGCTTACTTCTACTTATACTACTACTCTGTAACAACTTGGCGAGTTTATGGAGTTTCGCTGCTTCCTTGCAGTCTGAAGACGACGTGAAATGCCTCAAAGGCATCAAAGAATCTCTCATTGATCCTCAGGGGAAGCTCGCCTCGTGGCGTTTCGATAACACCACCGCCGGTTTCATTTGCGGCTTCGTCGGCGTCGTGTGCTGGAACGCGCAGGAGAATCGGATCCTCAATCTGGAGCTCCGTGACATGAAGCTCTCGGGTGGCGTCCCGGAGTCGTTGAAGTACTGTGGTAATAGTCTTCAAAAGCTGGATCTCGGGTCGAACGACATTTCCGGTACGATTCCTTCTCAAATTTGCGGCTGGTTGCCATTTTTAGTGACATTGGATTTGTCCGATAATCATCTGTCCGGGACTATACCTCCTACTCTTGTGAATTGCACGTACTTGAATACGTTAATCCTTTCCAATAATCAGCTCTCGGGTTCAATCCCTTATGAATTTGGGAGTTTGAGTAGGCTTAAGACGTTTTCTGTTGCTAATAATCGTCTTACTGGTACGATTCCTTCGTTTCTAAGTGGTTTTGAGAAGGAAGACTTTGGTGGGAATAGTGGGCTCTGTGGGGGTCCTCTTGGATCCAAGTGTGGTGGGTTGAGTAAGAAGAATCTTGCTGTTATTGTTGCTGCTGGGGTTTTTGGTGCTGCTGGTTCTTTGATACTGGCTTTTGGGTTGTGGTGGTGGTATCATCACTTGAGGATGGATGGAAAAAAGAAAGGAGGATATGGGGTTGGAATGGAAGATGATGATTGGGCTGTGAGGTTGAGGGGTTACAAACTTGTTCAAGTCACATTGTTTCAGAAACCCATTGTGAAGGTTAAATTAGGCGATTTAATGGCTGCCACCAATAATTTCAGTGCAAAACACATCCTGATGTCCACAAGAACAGGGACCACTTATAAAGCAGATCTTCCTGATGGCTCAACACTGGCAGTTAAGAGGCTTAGCAACTGTAACAACATTGGAGAGAAGCAGTTTCGCGCGGAGATGAACCGACTCGGTCAAGTCCGGCACCCGAATTTGGCGCCCCTTTTAGGTTTCTGTGTGGTGCAAGAGGAGAAACTCTTGGTTTATAAGCATATGTCAAATGGAACTCTGTCTTCCTTGTTGCATCATAAAAACAATGGTGGTGCATTATTGGAATTGGATTGGCCAATGAGGTTCAGGATAGGCTTTGGTGCAGCTAGGGCTCTTGCTTATCTGCATCATGGGTTCCATCCTCCAATTTTGCACCAAAACATGTGTTCCAATGTGATAGCTGTGGATGAAGATTTTGATGCTAGATTAATGGACTTTGGACTAGCTAGGCTTATGACTTCTAATTCTAATGAGAATAGCTTTGTGAGTGGGGAACTTGGGTATGTAGCTCCAGAATATCCAAGTACCCTTTTTGCTTCACTAAAAGGGGATGTGTATGGATTTGGTGTTGTGCTTTTGGAGTTAGTAACTGGACGCAAGCCAGATATTGAAGTTGTTGACAATGGAATTGGAGAGGAAGAGTTTAAGGGTAAGTTAGTGGATTGGGTAAATATGTTTTCTGGTTCTGGTCGAATAAAGGATTGTGTTGATAAGTCCATAAGTGGAAGAGGCCACGATGATGAGATTTCACAGCTTCTGAAGATTGCAAGTAATTGTGTGGTTTCTAGTCCCAAGGACAGGTGGTCTATGTACCAGGTTTATCATTCATTGAAGAGTTTGTCCAAAGACTACAGTTTCTCTGAACATGATGATGAATTTCCAATGGTTTTTGGTAAACCAGATAATGAAATCTCGTAG 1965 0.4341 MFCYQESNQDSSAAQDLWNQDLDRILIHCSDTMFKMAKNSLDLRNRLLLLILLLCNNLASLWSFAASLQSEDDVKCLKGIKESLIDPQGKLASWRFDNTTAGFICGFVGVVCWNAQENRILNLELRDMKLSGGVPESLKYCGNSLQKLDLGSNDISGTIPSQICGWLPFLVTLDLSDNHLSGTIPPTLVNCTYLNTLILSNNQLSGSIPYEFGSLSRLKTFSVANNRLTGTIPSFLSGFEKEDFGGNSGLCGGPLGSKCGGLSKKNLAVIVAAGVFGAAGSLILAFGLWWWYHHLRMDGKKKGGYGVGMEDDDWAVRLRGYKLVQVTLFQKPIVKVKLGDLMAATNNFSAKHILMSTRTGTTYKADLPDGSTLAVKRLSNCNNIGEKQFRAEMNRLGQVRHPNLAPLLGFCVVQEEKLLVYKHMSNGTLSSLLHHKNNGGALLELDWPMRFRIGFGAARALAYLHHGFHPPILHQNMCSNVIAVDEDFDARLMDFGLARLMTSNSNENSFVSGELGYVAPEYPSTLFASLKGDVYGFGVVLLELVTGRKPDIEVVDNGIGEEEFKGKLVDWVNMFSGSGRIKDCVDKSISGRGHDDEISQLLKIASNCVVSSPKDRWSMYQVYHSLKSLSKDYSFSEHDDEFPMVFGKPDNEIS 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1686 654 Gene3D Phosphorylase Kinase; domain 1 309 423 - -
Sto13g1686 654 Pfam Leucine rich repeat 170 228 IPR001611 GO:0005515
Sto13g1686 654 PANTHER - 57 647 - -
Sto13g1686 654 ProSiteProfiles Protein kinase domain profile. 348 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g1686 654 SUPERFAMILY Protein kinase-like (PK-like) 325 626 IPR011009 -
Sto13g1686 654 Gene3D Transferase(Phosphotransferase) domain 1 424 649 - -
Sto13g1686 654 Pfam Protein tyrosine and serine/threonine kinase 369 625 IPR001245 GO:0004672|GO:0006468
Sto13g1686 654 Pfam Leucine rich repeat N-terminal domain 71 113 IPR013210 -
Sto13g1686 654 SUPERFAMILY L domain-like 69 247 - -
Sto13g1686 654 Gene3D Ribonuclease Inhibitor 70 261 IPR032675 -
Sto13g1686 654 PANTHER OS07G0107800 PROTEIN-RELATED 57 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1686 Sto-Chr13 24151913 24160403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1686 48 652 Receptor kinase-like Gene Family AT3G28450 60.813 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Sto13g1686 PK_Tyr_Ser-Thr 1.4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1686 - - lang:109347314 887.871