Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1679 ATGCGAGCAAGGTATTTGAAAGCAGTACTTAGGCAAGAAGTGGCATACTTCGATTTGCACGTGACAAGCACGTCCGAGGTCATCATCACCAGCGTTTCCAATGACACCATCTTAATTCAGGAACAGGATGTTCTCAGCGAAAAGCTACATCGCAGCATTTGCAATGCTATGGAGGCTAGCCATCGTGGGCTTCCCTTTCGTGGTTTTCCTGGTAATCCCCGGTTTAATTTAATCTACTGTCGAACATTGATGGGTCTGGCCGGTAAGATCAGGGACGATTACGACCGTGCGGGTACAATAGCAGAGCAAGCAATCTCTTCCATAAGAATTGTGTATTCTTTCGTCGGCGAAACCGACACCGTTTCTGATTTCTCCTCTGCCTTACAAGCGTCGGTGAAATTGGGGCTAAAGCAAGGCCTAGCCATCGGAAGTAATGGCATAGTGTTTGCCATATGGTCCTTCATGTGCTACTACGGAAGCAGACTCGTTATGTATCACCGGGCTCAGGGAGGGACCGTTTTCGCCGTGGGAGCAGCCATAGCCGTTGGTGGATTGCGCCGGGTTGTCCAACGTGAAGTACCTCTCAGAGGCCAGCACAGCAGGGGAACGCATAAAGGAGATGATAAAGAGAGTCCCCACGATAGATTCAGAGAACACGGAAGGAGAAACTCCAGAGACAATCCACGGAGAAGTGGAATTCCATCACATACACTTCTCTTACCCGTCAAGACCAGAAAGCACCGTTCTGCGGGATTTTTCCCTGAAAGTACCAGCGGGGAGAACAATTGCGCTGGTGGGGGCGAGTGGGTCGGGAAAATCCACGGTGATAACGCTATTGCAGAGATTCTACGAGCCGGATGGTGGGGAGATACGGGTGGATGGGGTTCCGGTTCGGAGGTTGCGGCTCGGTGGCTCCGGTCACAGATGGGGTTGGTGAGCCAAGAACCGGTTCTGTTTGGGACGACGGTTAAGGAGAATATTTTGTTCGGGAAAGAGGATGCTACAGAGGAAGAAGTTCTGGAGGCTGCTTTGGCTTCCAATGCTCATGATTTTGTTTCACACTTGCCCATGGGATACGATACTCAGTGTGTATCTCAAGTCTCAACTATAGTCTATAGCCTATAG 1125 0.504 MRARYLKAVLRQEVAYFDLHVTSTSEVIITSVSNDTILIQEQDVLSEKLHRSICNAMEASHRGLPFRGFPGNPRFNLIYCRTLMGLAGKIRDDYDRAGTIAEQAISSIRIVYSFVGETDTVSDFSSALQASVKLGLKQGLAIGSNGIVFAIWSFMCYYGSRLVMYHRAQGGTVFAVGAAIAVGGLRRVVQREVPLRGQHSRGTHKGDDKESPHDRFREHGRRNSRDNPRRSGIPSHTLLLPVKTRKHRSAGFFPESTSGENNCAGGGEWVGKIHGDNAIAEILRAGWWGDTGGWGSGSEVAARWLRSQMGLVSQEPVLFGTTVKENILFGKEDATEEEVLEAALASNAHDFVSHLPMGYDTQCVSQVSTIVYSL 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1679 374 SUPERFAMILY ABC transporter transmembrane region 75 179 IPR036640 GO:0005524|GO:0016021
Sto13g1679 374 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 75 176 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto13g1679 374 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 1 185 - -
Sto13g1679 374 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 301 363 - -
Sto13g1679 374 MobiDBLite consensus disorder prediction 193 238 - -
Sto13g1679 374 Gene3D ABC transporter type 1, transmembrane domain 1 201 IPR036640 GO:0005524|GO:0016021
Sto13g1679 374 Gene3D - 300 362 IPR027417 -
Sto13g1679 374 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 185 IPR039421 -
Sto13g1679 374 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 301 363 IPR039421 -
Sto13g1679 374 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 298 363 IPR027417 -
Sto13g1679 374 MobiDBLite consensus disorder prediction 193 229 - -
Sto13g1679 374 Pfam ABC transporter transmembrane region 70 177 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1679 Sto-Chr13 24089148 24094027 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1679 1 362 Calmodulin-binding Proteins AT2G36910 30.711 6.90e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1679 K05658 - qsu:112027806 259.996