Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1666 ATGGGAggaatgatattttcatttcttgtACCCTGGAGATTGCTACAGAGGGCTTCTTTGAAGGAGGAGTGTGAAGAGGTCTTCCTTGTTCTAACTATGGCAGCTGTAGCACTCTCTCAATCTGGTTTTATAGCCCCAGGTGCTAGTAAAGCAAAAGCTAGTGCTGCTTCTATATTTGCTATTCTTGATCAGAAATCAAAAATAGATCCCAGTGATGACTCAGGAATCACACTACAAAATGTGAAAGGAGAAGTTGAGTTTTGCCACATCACTTTCAAGTATCCCACAAGGCCTAATACAATTGCTTTAGTGGgagaaagtggaagtggaaagtCCACTATAATCTCATTACTACAAAGATTTTATGACCCAAACTCTGGTCATATCACACTTGATGGAATAAATATCCAGAAGCTACAAATCAAATGGTTAAGGCAACAAATGGGTCTAGTAAGCCAGGAGCCTGTGTTGTTCAATGACACAATCCGAGCCAATATTGCATATGGAAAGGAAGATGCAGCAGAAGCAGAAATTGTTGCAGCAGCAGAATTGGCCAATGCCCACAAGTTCATTTGTGGCTTACATAAGGGGTACGACACAAGAGTGGGTGAGCGAGGAGTTCAACTATCAGGGGGACAAAAGCAACGGGTGGCGATTGCGCGAGCCATACTGAAGAACCCCACAATGCTACTGCTAGACGAAGCCACTAGTGCTCTTGATGCTGAGTCTGAAAAGATGGTTCAAGATGCATTGGATGGTGTGATGGTGGACCGAACCACAATTGTTGTGGCTCATAGGTTATCCACTATTAAGAGTGTGCATGTCATTGCTGTGCTTAAAAATGGAGCCATTGTTGAGAAAGGAAGCCACCAAACTTTGCTCAATAAGGGAGGACCCTATGCTTCATTACTAGCACTCCACACTAGTTCTAAATTAAGCACTTAA 945 0.4127 MGGMIFSFLVPWRLLQRASLKEECEEVFLVLTMAAVALSQSGFIAPGASKAKASAASIFAILDQKSKIDPSDDSGITLQNVKGEVEFCHITFKYPTRPNTIALVGESGSGKSTIISLLQRFYDPNSGHITLDGINIQKLQIKWLRQQMGLVSQEPVLFNDTIRANIAYGKEDAAEAEIVAAAELANAHKFICGLHKGYDTRVGERGVQLSGGQKQRVAIARAILKNPTMLLLDEATSALDAESEKMVQDALDGVMVDRTTIVVAHRLSTIKSVHVIAVLKNGAIVEKGSHQTLLNKGGPYASLLALHTSSKLST 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1666 314 PANTHER - 27 310 - -
Sto13g1666 314 Gene3D ABC transporter type 1, transmembrane domain 25 74 IPR036640 GO:0005524|GO:0016021
Sto13g1666 314 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 305 IPR027417 -
Sto13g1666 314 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 71 306 IPR003439 GO:0005524
Sto13g1666 314 ProSitePatterns ABC transporters family signature. 209 223 IPR017871 GO:0005524
Sto13g1666 314 Pfam ABC transporter 99 237 IPR003439 GO:0005524
Sto13g1666 314 Gene3D - 75 308 IPR027417 -
Sto13g1666 314 SMART AAA_5 97 298 IPR003593 -
Sto13g1666 314 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 27 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1666 Sto-Chr13 23872718 23876863 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1666 29 310 Calmodulin-binding Proteins AT2G36910 52.174 1.18e-94 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1666 K05658 - lja:Lj4g3v2226770.1 417.157