Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1648 ATGCTCGGCGGCCCCCACTACGACGTCTACCTCGGCCGCCGCGACGGCCGCGTTTCGACGGCCTCCGCCGTCGAAGGCAACCTCCCGCGACCCACGATGCCGATGTCGCAAATCATCCAGATCTTCGCCTCCAGAGGATTCTCCGCGGAGGAAATGGTGGCGCTGAGTGGGGCCCACACCATCGGATTCTCCCATTGCAGTGAAATCTTCAATCGCACCTCCTTCGGgtcttcgtcttcctcctccgATTCCGATCTCCCCAATTATAACCCTAGATTCGCGCAGGCGTTGCAGAGGGCTTGCGGCGATTTCCGGAAGGATCCGACATTGTCGGTGTTCAACGATGTGATGACACCCAACAAATTCGATAACGCGTATTTCCAGAATCTCCCGAAGGGATTGGGGGTTTTGAGATCGGATCACGGGTTGTATAACGACCCGAGAACGAGGCCGTTCGTGGAGAAATTCGCGACGGATCAGAACGCGTTTTTTGACGCGTTTGCGAAGGCGATGCAGAAGCTGAGCCTCGTGGGTGTGAAAACGGGAAGGAGAGGGGAAATCAGGCGTAGGTGTGATCAGATTAATTGA 588 0.5442 MLGGPHYDVYLGRRDGRVSTASAVEGNLPRPTMPMSQIIQIFASRGFSAEEMVALSGAHTIGFSHCSEIFNRTSFGSSSSSSDSDLPNYNPRFAQALQRACGDFRKDPTLSVFNDVMTPNKFDNAYFQNLPKGLGVLRSDHGLYNDPRTRPFVEKFATDQNAFFDAFAKAMQKLSLVGVKTGRRGEIRRRCDQIN 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1648 195 PANTHER PEROXIDASE 31 1 195 - -
Sto13g1648 195 Gene3D - 1 195 - -
Sto13g1648 195 Pfam Peroxidase 2 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto13g1648 195 ProSiteProfiles Plant heme peroxidase family profile. 1 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto13g1648 195 PANTHER - 1 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto13g1648 195 PRINTS Haem peroxidase superfamily signature 3 15 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto13g1648 195 PRINTS Haem peroxidase superfamily signature 51 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto13g1648 195 PRINTS Haem peroxidase superfamily signature 115 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto13g1648 195 SUPERFAMILY Heme-dependent peroxidases 2 195 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sto13g1648 195 Gene3D Peroxidase, domain 2 29 174 - -
Sto13g1648 195 PRINTS Plant peroxidase signature 3 18 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto13g1648 195 PRINTS Plant peroxidase signature 50 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto13g1648 195 PRINTS Plant peroxidase signature 113 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto13g1648 195 PRINTS Plant peroxidase signature 129 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto13g1648 195 PRINTS Plant peroxidase signature 169 182 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto13g1648 195 ProSitePatterns Peroxidases proximal heme-ligand signature. 51 61 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1648 Sto-Chr13 23705864 23706451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1648 2 195 Peroxidase AT5G40150 64.948 2.80e-89 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1648 K00430 - cit:102630558 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g1648 13 23705864 23706451 Sto13g1648 13 23705864 23706451 ECH
Sto8g1911 8 12268419 12268997 Sto13g1648 13 23705864 23706451 ECH