Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1642 ATGTCACAAGGTTATGCTATTGAGCTTTACTTTGACCCCGCGCTTGAAAACCAGGTCTTGAAGGCTTGGAATGTTCTAGCTCGCCGACAAATCAGTACCCATCTCATCGAAATCGAGTCTCGCCCTCACATCACACTCTTCTCCACTCCATTCATTGATCCTGCGAAGCTTGAATCCATCGTGAAGAGTCTCGCAGCTAAGTTAGAACCTTTGCCTCTAACTCTCTCTTCCATTGGGACCCTTCCAAATGATAACAATGTCCTGTTTCTTGCTCCTACGCCTTCAATTTCGCTTCTTCAGTTCCAATCTCAACTGTGTGATGCAATGAAGAAAGAAGGAATCGAGATTGGAGAGGAGTTTCGTGCTGATTCTTGGATTCCTTATTGTTCTGTTGCGCAGGATGTGCCTAAAACTAGGATGGCTGAGGCTTTCTGTGTGTTGAGGGACTTGAAATTGCCAGTTTCTGGGTATGCTATGGATATTGGGCTGGTTGAATTCTCACCTGTTCGTGAGCTTTTCTCATTTGTGATGGGAAACTCAGTAGAAGCATAA 552 0.4493 MSQGYAIELYFDPALENQVLKAWNVLARRQISTHLIEIESRPHITLFSTPFIDPAKLESIVKSLAAKLEPLPLTLSSIGTLPNDNNVLFLAPTPSISLLQFQSQLCDAMKKEGIEIGEEFRADSWIPYCSVAQDVPKTRMAEAFCVLRDLKLPVSGYAMDIGLVEFSPVRELFSFVMGNSVEA 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1642 183 PANTHER - 1 182 - -
Sto13g1642 183 SUPERFAMILY LigT-like 4 157 IPR009097 -
Sto13g1642 183 Pfam 2'-5' RNA ligase superfamily 41 156 - -
Sto13g1642 183 Gene3D Cyclic phosphodiesterase 5 176 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1642 1 183 Calmodulin-binding Proteins AT5G40190 71.038 9.12e-94 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1642 - - fve:101311595 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g1642 13 23615311 23615862 Sto13g1642 13 23615311 23615862 ECH