Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1547 ATGGGTTCTCCGGGAAACCCTAATTGGGTATTCGATTATGGTTGTATAGACGACATTCCCGTCCCTGGCGGTGACCTTCTCTCCTTCGACCCACCCAATTTTTCTTGGCCCTCTCATTCTCTCACCACTCCTCCTCCTGATTTCAGTGTGGAGTTGGATGACTCGTTTGGGAATTCAGATGGTTTTAATGAAAGTGGGTCCAAAAAGCGGTTCCTAGAGTTGGGTTCTATCCTTGATCCTGGCAGGCCTACCAAAATGGACAAGGCTGTTATATTAAGTGATGCAGTTCGAATGCTATCTCAGTTACGAGGCGAGGCTCAGAAGCTGAGAGAGTCCAACGAAAATCTGCAGGAGAAGATAAATGAACTGAAGGCTGAGAAGAATGAGCTACGCCATGAGAAGCAGCGATTAAAGCTTGAGAGAGATAACATCGAGCAGCGGGTTAAAGTCTTGAGTTCGCAACCAGGCTTCCTGCCTCATCCTCCCACCCTCTCAGCTCCATTTCCTGTTTCAGGACAAGTTTTTGGTGGCAAAATGGTGCCATTCATGGGTTACCCAGGAGTTTCTATGTGGCAGTTCTTGCCGCCTGCTGCTGTCGATACTTCACAAGACCATGTGCTTCGTCCTCCAGTTGCATAA 639 0.482 MGSPGNPNWVFDYGCIDDIPVPGGDLLSFDPPNFSWPSHSLTTPPPDFSVELDDSFGNSDGFNESGSKKRFLELGSILDPGRPTKMDKAVILSDAVRMLSQLRGEAQKLRESNENLQEKINELKAEKNELRHEKQRLKLERDNIEQRVKVLSSQPGFLPHPPTLSAPFPVSGQVFGGKMVPFMGYPGVSMWQFLPPAAVDTSQDHVLRPPVA 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1547 212 PANTHER TRANSCRIPTION FACTOR ILR3-LIKE 69 212 - -
Sto13g1547 212 PANTHER TRANSCRIPTION FACTOR ILR3-LIKE 3 70 - -
Sto13g1547 212 PANTHER BHLH TRANSCRIPTION FACTOR 69 212 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Sto13g1547 212 PANTHER BHLH TRANSCRIPTION FACTOR 3 70 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Sto13g1547 212 Coils Coil 92 154 - -
Sto13g1547 212 Gene3D - 66 131 IPR036638 GO:0046983
Sto13g1547 212 CDD bHLH_AtILR3_like 70 131 - -
Sto13g1547 212 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 69 129 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1547 Sto-Chr13 22337911 22341424 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1547 1 212 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 50.413 1.38e-70 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1547 - - mnt:21402686 300.441