Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1499 ATGGCGGATGAGTTTTCAGGAGCGATCATTGATGGAAGTTGGTGGAATATTTACAATTCATCAAAATCTCTATTATTCCCTCCTCCTAATAATAACAACGAATTAGCAGGGAACTTCATAGCAGATTGGAAAATTCAtgatcaagaagaagaagaaggaggaaacgACGACGTTtctgatcatcatcatcaccaacaGTTAGGGAAGCCAAAGCAGAGTCATCAGAATCCGATTGTATATGGAAGCCATGGTAGCACTTTCCATTCTAtccttgaagaagaagaagaaatccaTAAGGATTATTGGAGCCCAATGACCAAAATCCAAGTTTCCTCCATTAATGGAAGTCTTAAGCTCATGAAACCAAGAACTTGCCTGGGTGGTGGTGTTCCTCTTCCTCTAATTCATCATCCACAATCTCATAATGATTCATCCATTTCTTTTAAACCCATAATGCCAAAGCCAAAATTTAGTACTGGATTATTCCACCATTTTTCTTCACCTCAAGAAGAAGAACTTTATAACGTGcacaagagagaagagagtcAAGATTTGGCACAGGGAAGTGATGGTGAACCATTATTGATCAAAAGGCCAAGAATTGAATCTCCAATGCCAACTTTTAAGACCGACACAGCATCAGTTCTTCACGATGCCATTGACTACATCAAGTATCTTCATGAACAACTCAGCGTGAAAATAGGAGAAGGGGTAAATAATCATCAAGATTTAAGAAGCCAAGGGCTGTGCTTGGTGCCTCTATCAAATACCCTCCCAATTGTTAATGGTGAGAATATGGATGCTGAGTTGTGGACGCTAACATATGATGGTTCGATCATGAAAccacaaaaataa 855 0.3439 MADEFSGAIIDGSWWNIYNSSKSLLFPPPNNNNELAGNFIADWKIHDQEEEEGGNDDVSDHHHHQQLGKPKQSHQNPIVYGSHGSTFHSILEEEEEIHKDYWSPMTKIQVSSINGSLKLMKPRTCLGGGVPLPLIHHPQSHNDSSISFKPIMPKPKFSTGLFHHFSSPQEEELYNVHKREESQDLAQGSDGEPLLIKRPRIESPMPTFKTDTASVLHDAIDYIKYLHEQLSVKIGEGVNNHQDLRSQGLCLVPLSNTLPIVNGENMDAELWTLTYDGSIMKPQK 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1499 284 CDD bHLH_AtbHLH_like 197 232 IPR045239 -
Sto13g1499 284 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 206 233 IPR036638 GO:0046983
Sto13g1499 284 MobiDBLite consensus disorder prediction 49 66 - -
Sto13g1499 284 PANTHER TRANSCRIPTION FACTOR BHLH103 209 262 - -
Sto13g1499 284 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 209 262 - -
Sto13g1499 284 MobiDBLite consensus disorder prediction 49 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1499 Sto-Chr13 21707870 21714421 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1499 170 281 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 32.484 6.17e-17 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1499 - - gmx:100805087 90.1225