Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1237 TTGAACCCTTCCGATCGCCGATCATCAACGCCACCGTCGCTCAACGTCACCGACGCACCTCCTACTGCCGGTCATCAACGCCGCTGCACCTGCCGCACGTCGTTCATCGTCAGTCACCGTCATCGCGGCGTTAGAAAGCATTGGACAAATAAAAGTAGGGTGGATCAAATTACAATATTATCTCAAAAATTTGTATGTTTCAAAGAAGGGTTCAAGAAGAAACGTGATTGTGAAGCAAAGAGAGTTCATAAAGATATCAGAACCGGATGTTTGGCTCAAATGATCGTTGGTCGACAACCAAATGGAAAATATGTGGTTACATATTTTGAGAAGCAACATAATTATGCTTTGGCCACCCCTAGAAGCAGACACAAATTACCATCACAGAGAAAACTTTCTGCTGCTCAGGCCACTCAAATTGAATTGGCAAATCAGTCTGGCATtagacaaaaattaatttttgaattcatGAGTCGACAGGTTGGAGGACGAGAGAATGTTGGATGTACTCTTAAGGATGTTAGTAATCATTTGAGTTCTAAGAGGACGAAAGAAATGAAGGAAGGAGAGGCCTACACTTTGCTTCATTATTTTCAGTCAAGACAGTCTGAGAACCCATCATTTTTTTATGACATTCAACTTGATGCTGAAGATCAAATCACAAATATTTTTTGGGCAGATGCAGAGATGGTTGTAGATTATGTTTGTTTCGGAGATGTGGTATCTTTTGATACTACTTATCGTACCAACAAAAATTGTCGATCCTTTGCACCCTTTGTTGGATTTAATCACCATCGACAAACTGTCATATTTGGTGCAGCACTATTGTATGATGAAACTGCCGAATCATTTGAATGGTTGTTCAAGACTTTTCTTAAGGCCATGTGTGGGAAGAAGCCAAAAACAATTTTTACAGATCAAGATGCTGCAATGGCAAAAGCAATTTCAATGGTTTTACCTGATTCTTATCATCGCTTATGCACTTGGCATTTATTTCAAAATGCTCTCAAGAATGTCAATCATGCCTTTAAGAAGTCAGATTCTTTCGCTTCAGACTTGAGATGTTGTATTTATGACTACGAGTATGAAGATGAATTTTTGAATGCTTGGGAGTCAATACTTGATAAGCACGACCTTCGTCAAAATAAGTGGATGCaagatttattttga 1170 0.3863 LNPSDRRSSTPPSLNVTDAPPTAGHQRRCTCRTSFIVSHRHRGVRKHWTNKSRVDQITILSQKFVCFKEGFKKKRDCEAKRVHKDIRTGCLAQMIVGRQPNGKYVVTYFEKQHNYALATPRSRHKLPSQRKLSAAQATQIELANQSGIRQKLIFEFMSRQVGGRENVGCTLKDVSNHLSSKRTKEMKEGEAYTLLHYFQSRQSENPSFFYDIQLDAEDQITNIFWADAEMVVDYVCFGDVVSFDTTYRTNKNCRSFAPFVGFNHHRQTVIFGAALLYDETAESFEWLFKTFLKAMCGKKPKTIFTDQDAAMAKAISMVLPDSYHRLCTWHLFQNALKNVNHAFKKSDSFASDLRCCIYDYEYEDEFLNAWESILDKHDLRQNKWMQDLF 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1237 389 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 44 389 - -
Sto13g1237 389 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 44 389 IPR031052 GO:0006355
Sto13g1237 389 MobiDBLite consensus disorder prediction 1 25 - -
Sto13g1237 389 MobiDBLite consensus disorder prediction 1 20 - -
Sto13g1237 389 Pfam FAR1 DNA-binding domain 44 118 IPR004330 -
Sto13g1237 389 Pfam MULE transposase domain 240 334 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1237 Sto-Chr13 17469993 17471792 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto13g1237 MULE 1.7e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1237 K17604 - qlo:115964294 502.671