Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sto13g1217 | ATGAAGGCACAAGTGTTGATGATATTAACTCAGATGGGTTATACTTTGTTGTATTTCCTAACCCAGGCTTCCTTCAATCATGGCATGAGTCCTCACGTTTATGTAACCTATCGCAATATTGTCGCTGCCATTGTTATGTTCCCTTTTGCATTTTTTCTAGAGAGGAAAATTAGGCCAAAGCTCACACTCCCTCTTTTCTTGGAAATTTTTATGCTTTCTCTGTTTGGGTTTGGTTTGACTCTTAACATGTACTTCGCAAGCCTAAAATACACAAACCCAACCTTTGTGACTTCAGTGACCAACACTATAGCTTCCATCACCTTTGTTCTTGCTGTCATACTCAGaaaattaaaaactgTTAAGTGGGAATCGAAAGGGCTACCTTCAGGAGGTGGTCAAGAAGCATGA | 408 | 0.3922 | MKAQVLMILTQMGYTLLYFLTQASFNHGMSPHVYVTYRNIVAAIVMFPFAFFLERKIRPKLTLPLFLEIFMLSLFGFGLTLNMYFASLKYTNPTFVTSVTNTIASITFVLAVILRKLKTVKWESKGLPSGGGQEA | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sto13g1217 | 135 | PANTHER | WAT1-RELATED PROTEIN | 3 | 115 | - | - | |
| Sto13g1217 | 135 | PANTHER | WAT1-RELATED PROTEIN | 3 | 115 | IPR030184 | GO:0016021|GO:0022857 | |
| Sto13g1217 | 135 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 37 | 115 | - | - | |
| Sto13g1217 | 135 | Pfam | EamA-like transporter family | 5 | 116 | IPR000620 | GO:0016020|GO:0016021 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sto13g1217 | Sto-Chr13 | 17023800 | 17024545 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sto13g1217 | 7 | 125 | Nodulin-like Gene Family | AT3G56620 | 39.837 | 3.85e-29 | 107 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sto13g1217 | - | - | qsu:111996185 | 185.652 |