Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1151 ATGCAAATACCACATAAAGACATGATTGAGCTGAAGCAGCAAACTCACTGCAATTCAAGATCTGGATATGGAATAGAGAAATTCCAGGAGCTGATGTGGTGTGAAGGAAGGAACGAACGAACCCGGTCCGACAGTCTTATCCCCTTCGGACTCAATCCCACAACCCTCCCTGGTCTTCTGCTTCCAAACTTGTATAGTCTTAATTACGGATTAACCATATTGGAGAAGGCTCTTAAGGATGAAACAATGGGTGGTGATGTAAACAGatccaagaaaaaaaatgtgataGTGAGAGGGGTACTGTCTGTGACTGTGATATTGGCACAAGACCTGCCACCTACGGATTTATCGGGCAAGTCTGATCCTTATGTGGTCCTAATCTTGAAAAAGGCCGACCAAAAACTCAAGACCAGGGTTGCGAATCCAAGTCTAAACCCAGTTTGGAATCAAACGTTTGACTTTGTTGTGGTGGATGGCTTGCACGAAATGTTAAATAATAGAAGACTCACCGTTGCCGTTCACCGTTGTCGTTCGCTGTTCGCTGTCGTGCTGCTCCCTCGTCGTTGCTTGAAGAGAAAATCGTGCTTCTGTGAGTTTAGGTCAGAATAG 609 0.4401 MQIPHKDMIELKQQTHCNSRSGYGIEKFQELMWCEGRNERTRSDSLIPFGLNPTTLPGLLLPNLYSLNYGLTILEKALKDETMGGDVNRSKKKNVIVRGVLSVTVILAQDLPPTDLSGKSDPYVVLILKKADQKLKTRVANPSLNPVWNQTFDFVVVDGLHEMLNNRRLTVAVHRCRSLFAVVLLPRRCLKRKSCFCEFRSE 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1151 202 PRINTS C2 domain signature 116 128 IPR000008 -
Sto13g1151 202 PRINTS C2 domain signature 142 155 IPR000008 -
Sto13g1151 202 Pfam C2 domain 99 175 IPR000008 -
Sto13g1151 202 CDD C2 101 164 - -
Sto13g1151 202 Gene3D C2 domain 75 185 IPR035892 -
Sto13g1151 202 PANTHER SYNAPTOTAGMIN-4 57 164 - -
Sto13g1151 202 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 93 176 IPR035892 -
Sto13g1151 202 SMART C2_3c 100 199 IPR000008 -
Sto13g1151 202 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 57 164 IPR045050 GO:0008289
Sto13g1151 202 ProSiteProfiles C2 domain profile. 79 202 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1151 Sto-Chr13 15023147 15023947 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1151 99 150 C2H2 Transcription Factor Family AT4G05330 53.846 8.65e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1151 - - fve:101306456 130.954