Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1052 ATGGAGACTGCTTTTTCAAAGCTCGCTCTGCATGCTGTGAAGGATCAGCAAGAAAATTATACAGAGGAAAAAGAGGAATTGCTTGGACAAGTCGAGATATGGAAATACATGACAGCTTTCACTGACTCTGTGGCTCTGAAAGTAGCCATTGAGCTTCGTGTGGCCGACATCATAGACCAACACGGCCAACCCCTCTCCTTACAGAAGATTCTAGACAACATTGTTGACGCACTCTCTCCTGACACCACCTTCCTCTTCCGAATCATGCGAGTCCTCGTTCGCCGCAAGATCTTCTCTGCCCACCAATCCGAACCCTCGGGAGAAACCCTCTATGGCCTAACTAGAGCTTCCAAATGGATCTTGCGAGACACCACAATGACTCTGGCTCCCATGCTTCTGCTGGAGAATCATCCCCTGCATTTAAACCCCACACACTACATTAGTGATTGCATCAGAGAGGGGACCAAGAATGGGACCGCGTTTTTCAAGTGTCATGGGCATGAGCAATTTGACTTGACGGGGTTGGATCCTGAGTATAACAAGTTGTTCAATGAAGGGATGGTTTGTACTGCGAGGATTGTATCCAAGGCTGTGATTGCTGGGTATGAAGATGGGTTCAACAAGATTAATTCTTTGGTGGATGTAGGAGGTGGGATTGGAGGATCATTGTCTGAGATTGTTCGAGCATACCCACATATTAAAGCTATCAACTTTGATTTGCCACATGTGGTTGCTACTGCGCCTAACTACGATGGAATCACCCATGTTGGAGGAGACATGTTTGCCTCCATCCCCTTTGCTGATGCTATCTACATGAAGTGGATTCTGCATGACTGGAGTGACGAGCACTGCATAAAGATATTGAAGAATTGCAGGAAGGCAATAGCGGAGAAGACATGGAAGGTGATAATAGTGGACCATGTACTTCAGCCAGAAGGGAATAATGAAATCTTTGATGAGACAGGATATGCTTTTGATATGATGCTTCTTGCTCACAACGCTGGAGGCAGAGAGAGAACTGAGCAAGACTGGAAGTGGCTCTTTGCTGAAACTGGCTTCCCTCGTTACAACATCATCAGAATCAAAGCCCTTCCTTCCATCATTGAGGCCTTCCCTATCTGA 1122 0.4643 METAFSKLALHAVKDQQENYTEEKEELLGQVEIWKYMTAFTDSVALKVAIELRVADIIDQHGQPLSLQKILDNIVDALSPDTTFLFRIMRVLVRRKIFSAHQSEPSGETLYGLTRASKWILRDTTMTLAPMLLLENHPLHLNPTHYISDCIREGTKNGTAFFKCHGHEQFDLTGLDPEYNKLFNEGMVCTARIVSKAVIAGYEDGFNKINSLVDVGGGIGGSLSEIVRAYPHIKAINFDLPHVVATAPNYDGITHVGGDMFASIPFADAIYMKWILHDWSDEHCIKILKNCRKAIAEKTWKVIIVDHVLQPEGNNEIFDETGYAFDMMLLAHNAGGRERTEQDWKWLFAETGFPRYNIIRIKALPSIIEAFPI 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1052 373 PIRSF O-mtase 11 373 IPR016461 GO:0008168
Sto13g1052 373 CDD AdoMet_MTases 212 308 - -
Sto13g1052 373 Gene3D - 15 120 IPR036388 -
Sto13g1052 373 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 370 IPR029063 -
Sto13g1052 373 Pfam O-methyltransferase domain 146 353 IPR001077 GO:0008171
Sto13g1052 373 Coils Coil 10 30 - -
Sto13g1052 373 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 34 372 IPR016461 GO:0008168
Sto13g1052 373 SUPERFAMILY "Winged helix" DNA-binding domain 24 123 IPR036390 -
Sto13g1052 373 Pfam Dimerisation domain 45 93 IPR012967 GO:0046983
Sto13g1052 373 PANTHER (R,S)-RETICULINE 7-O-METHYLTRANSFERASE-LIKE ISOFORM X1 25 372 - -
Sto13g1052 373 Gene3D Vaccinia Virus protein VP39 122 373 IPR029063 -
Sto13g1052 373 PANTHER O-METHYLTRANSFERASE 25 372 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1052 Sto-Chr13 11829452 11830835 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1052 44 359 Monolignol Biosynthesis Gene Families AT5G54160 38.438 1.06e-75 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1052 K22588 - gmx:100800801 598.586