Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g1041 atGGCTGGATTTTCCCAACCTTTGGTTGTTCCCAAACCTGGTGAATGGGTGAAGGGAAAATTGGTAGGATCAGGATCATTTGGCACTGTTCATTTGGCAATAAATAAATCCACAGGAGGACTCTTTGTGGCAAAATTAGCACACACAAAGGCTGGATTTGGGGCTTTGGAGAATGAGGTCAAGATTCTGAAAACCCTAGATTCATCATCTCCTTATATAGTTCAATGCTTAGGGTCAGAGACAGAAGGAGGTAATCTCACAGTTCTAATGGAGTACATGGGTGGGGGTAGTTTGGCTGATGTGGCAGAGAAATTTGGAGGGTCTCTACCTGAAGATGTGGTTCGTTTGTACACCAAACAAATACTCCAAGGCCTCAAGTACCTTCACCATCATGGGGTTGTGCATTGTGACCTCAAATGCAAGAATGTGCTTCTAGGGTCTTCTGGGAACATCAAATTGGCAGATTTCGGGGGTGCGAAAAGGTTAAAGGACACAGAAAATGGGTGTTTGTTGAAGAACAAGAATAAGAAGAACTGTCTGGAATCTTTAACTGGGACCCCTCTATGGATGGCCCCTGAAGTTTTGAGGAATGAAGAGCTTGATTTTGGAGCAGATGTATGGTCCTTGGGATGTACTGTGATTGAAATGGCCACTGGTAGGCCTCCATGGGGTGACACTAAATATGATGTGAAAAACCCCATGGCTGCTCTTTTGAGGATTGCTTGTAGTGATGAGAAACCTCAATTCCCAACCCATTTCTCAAAGCAGGGTTTGGATTTCTTGAGCAAGTGTTTGGAGAGAGACCCATGTAAGAGATGGACATGTGAGGAATTACTTAGGCACCCTTTTGTGTCAAGTGATTCTTCATCATCAACATCACCACCACAACCTTCTTTTTCTCAGAAAACCTATGCTTCCTCACCAGCTAGTGTTTTAGGGGTTCAAAGttttgaagatgatgatgatgatgatgatgatgatgatgaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagcagaaagtCCAGAAGGAAATCATTTCTCACTTATGAGAAGCCCATTCACAAGGTGCAAAGGAAATAATGCATTAATGCTATGGCAAATGGAAGACTGTGGATCTGATACATCAGAGGATTGGATTACTGTTAGATCAGGCTAA 1182 0.3968 MAGFSQPLVVPKPGEWVKGKLVGSGSFGTVHLAINKSTGGLFVAKLAHTKAGFGALENEVKILKTLDSSSPYIVQCLGSETEGGNLTVLMEYMGGGSLADVAEKFGGSLPEDVVRLYTKQILQGLKYLHHHGVVHCDLKCKNVLLGSSGNIKLADFGGAKRLKDTENGCLLKNKNKKNCLESLTGTPLWMAPEVLRNEELDFGADVWSLGCTVIEMATGRPPWGDTKYDVKNPMAALLRIACSDEKPQFPTHFSKQGLDFLSKCLERDPCKRWTCEELLRHPFVSSDSSSSTSPPQPSFSQKTYASSPASVLGVQSFEDDDDDDDDDDEEEEEEEEEEEEEEEEEEAESPEGNHFSLMRSPFTRCKGNNALMLWQMEDCGSDTSEDWITVRSG 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g1041 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Sto13g1041 393 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Sto13g1041 393 CDD STKc_MAPKKK 15 284 - -
Sto13g1041 393 MobiDBLite consensus disorder prediction 284 360 - -
Sto13g1041 393 MobiDBLite consensus disorder prediction 316 349 - -
Sto13g1041 393 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 10 392 - -
Sto13g1041 393 SUPERFAMILY Protein kinase-like (PK-like) 14 310 IPR011009 -
Sto13g1041 393 ProSiteProfiles Protein kinase domain profile. 16 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g1041 393 Coils Coil 324 349 - -
Sto13g1041 393 Pfam Protein kinase domain 18 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g1041 393 Gene3D Phosphorylase Kinase; domain 1 9 98 - -
Sto13g1041 393 SMART serkin_6 16 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g1041 393 Gene3D Transferase(Phosphotransferase) domain 1 99 359 - -
Sto13g1041 393 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1-LIKE 10 392 - -
Sto13g1041 393 MobiDBLite consensus disorder prediction 284 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g1041 Sto-Chr13 11564323 11565504 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g1041 10 327 MAP Kinase Kinase Kinase AT1G54960 39.394 4.31e-73 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Sto13g1041 Pkinase 2.1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g1041 - K20716 qsu:112028480 389.808