Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0986 ATGCAACTGTGCAATTCATGGAATGCctctaagttgcattttagtTTGGATATTCCTGAAGTTGTACAATACAAAGCATCATTGAGTACCACAAATCTAAGCCAACAACTTAGCCAATCGGTTACTCAGACATCAATTAATTCACAAGATGAATTTCTGTCTTCAGCTAAGTACATGTCAATTGGTGACATTAGACAATCAACTGAAATTGGAATGTTTGGAACACTAGGAAACATTCACAAAATACAAACAAACTTTGGATGGTACTATGAATCGTACAACAAATGTAGGAAGAAGGTTAAAATTGTGGATGGTCAATTAATTTGCCCAGGATGTGAAAAAACTCCACCTTTGCTTATACCTAGATATAAGATTCATGTATTGGTCATGGATCACACTGGCAGTGCTTATTTTGTTCTATTCGACACTCATGCATACAAGCTTATCCACAAAACTGCCAGAGAACTTAAGCTACGTCTAACTGAGGCTACTACTGGCGATGGTTCATCATTTCCTGAAGAAATTGAGCAAATTGTTCAAAGAAGATATCTATTCAAGATCAAAATAATTGAGTTTAATATTGAACAAAATTCAAGTTTTACAGTATCCAATGTCACCGATGATGTCAACTTAATTAATGCTTTTATATCGTCCCAAGGAATCAACAAGGTAGAGTATGAAGGTGTAAGTGCAAATTCAACTTTTGCTTGA 711 0.3418 MQLCNSWNASKLHFSLDIPEVVQYKASLSTTNLSQQLSQSVTQTSINSQDEFLSSAKYMSIGDIRQSTEIGMFGTLGNIHKIQTNFGWYYESYNKCRKKVKIVDGQLICPGCEKTPPLLIPRYKIHVLVMDHTGSAYFVLFDTHAYKLIHKTARELKLRLTEATTGDGSSFPEEIEQIVQRRYLFKIKIIEFNIEQNSSFTVSNVTDDVNLINAFISSQGINKVEYEGVSANSTFA 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0986 236 CDD RPA1_DBD_C 73 211 IPR013955 -
Sto13g0986 236 Gene3D - 38 215 IPR012340 -
Sto13g0986 236 PANTHER BNAC07G49340D PROTEIN 45 217 - -
Sto13g0986 236 PANTHER REPLICATION FACTOR A 1, RFA1 45 217 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Sto13g0986 236 SUPERFAMILY Nucleic acid-binding proteins 58 206 IPR012340 -
Sto13g0986 236 Pfam Replication factor-A C terminal domain 73 206 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0986 Sto-Chr13 10452102 10454074 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0986 73 206 Core DNA Replication Machinery Family AT5G08020 28.467 3.16e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0986 - - mtr:MTR_4g032565 110.538