Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0816 ATGACACCTTCTCGGGTGGCTGGAGGGTTAACCCAATCATCATCAAATTCTGGAATATTCTTTCAAGGGGATGGGCATTCACTGAGTGTGGTTCACTCTCACTTAAGCTCCTCTTTTGGTAACTCATCTAATTCGATGCCTGGATCCGGACGTTCAAATTTGGGTCCGGTTTCTGGGGACATGAACAATGCAGTTTTAAACAGTGTGGCAAATTCTGGACCAAGTGTAGGAGCGAGCTCTTTAGTCACAGATGCAAACTCTGCACTTTCAGGGGGCCCTCATTTGCAGAGAAGTGCTAGCATTAACACAGATTCTCACTTACGGTTACCTGCATCACCCATTTCTTTCTCGTCAAATAATATTAGTATATCTGGTTCATCAGTCATGGATGGTTCTTCTGTAGTACAGCAGAGCTCCCATCAAGACCAGAGTGTTCAACAATTGCAGCAGACCCAGCAGCCTCCACAGGGTGCTTCAACTTCTGCATCTTTGCCTGCATTGCAAACTGGCCCAGCTTCATTTCCAATGGGTGCAAGACTACCTGCTTCTTTTGTTCAGGATCCAAATAATTTAACCCAGCTACAGAAGAAACCTCGGCTGGATATCAAGCAGGAAGATATACTGCAACAGCAAGTAATGCAACAGATTCTTCAGAGACAGGACCCCATGCAATTCCAGGGTCATAATCCACAACTACAACCAATGCCATCCATGAAACTCCCATATGACAGTGGTGTATGTGCCCGCCGACTGATGCAATACCTGTATCACCAAAGGCAGAGACCAAATGAAAATAGCATTGCCTATTGGAGGAAATTTGTTGCTGAATATTACTCTCCCCGGGCAAAGAAACGGTGGTGCTTGTCGTTATATGATAATGTTGGGCATCATGCACTTGGTGTTTTTCCTCAAGCAGCTATGGATGCATGGCAATGTGACATATGTCATTCTAAATCTGGACGGGGATTTGAGGCAACTTTTGAAGTACTCCCTAGACTTAATGAAATCAAATTTGGCAGTGGAGTGATTGATGAACTTCTGTTTTTGGACTTGCCACGCGAATGTAGATTTCCTTCAGGTGTAATGATGTTAGAATATGTAAAAGCTGTTCAAGAGAGTGTATATGAACAGCTTCGGGTTGTTCGTGAGGGTCAACTTCGTATCATATTCACACAAGACCTGAAGATTTTATCTTGGGAATTTTGTGCAAGGCGTCATGAAGAACTCCTTCCTAGAAGGTTGGTTGCACCACAGGTCAACCAGCTGGTTCAGGTAGCACAGAAGTGCCAGAGTACAATTGCTGATAGTGGCTCTGATGGGATTTCTCAGCAGGACTTGCAGACAAATAGCAATATGGTGTTGTCAGTTGGGCGTCAACTTGCCAAGAGTTTGGAGTTACAGTCATTGAATGACTTGGGTTTCTCCAAAAGATATGTGAGATGTTTGCAGATATCTGAGGTTGTAAATAGCATGAAAGATCTGATGGATTTCTGCCGAGAGAACAAAGTTGGTGCAATTGAGGGCTTGAAAAATTATCCTCGGCATTCTACTGTAGCCAAGCTCCAGATGCAAAAGATGCAGGAGATGGAACAGCTAGCAAGTGTTCAAGGTCTGCCAACTGACCGAAACACACTTAATAAGCTGATGGCATTGCATCCTGGGTTGAACAACCAAATCAGCAATAATCATAATATTGTTAATCGTGGCTCTTTAAGTGGGTCTGCACAAGCTGCTCTGGCGCTGACTAACTACCAGAATCTTCTGCTGAGGCAAAACTCAATGAATTCAAATTCTAACTCACTGCAGCGAGAGTCGTTGTCTTCCCTAAATAATTCAGCTCAGAGTCCTTCAACCTTACAAGGTTCTGCCACTGCTTTAATTCCGGGATCCTTGCAGAATTTACCTGTTAGTGGTCTCTCAAGTGCCCATCTACcacagcagcagcagcaacaaCTTCAACAGCGCCCATTGGGTGCAAATAACTTGCGCCAGCAAAGCCATTCACAGGGCTCTGAAGGAAACCAAGCTCTACAACAGCAGATGTTCCAGAGACTGCTGCAAGAAGTGTCAGATAGCAGTGGGGGAGTAATACAATCCCAGCCCCTTTCTGGACCCAATGCAAATGGGGGTATGACAAAGAATGCGTTGGGTTTTCCAGGCAACGCTCCTCCAATAACTCGAGTTAGTACCAATGTTTCAGGAAGCAATGGACGTGCCCCCAGCAGGAGCAACAGTTTCAAAGCTGCTTCAAATAGTGATTCTTCTGCAGCTGGTGGCAACAATGGATTCAACCAGAGAACTTCTGATATGCCACAGAATCTCCATTTACAGGAAGATGTTCAGGATATTGCGCATGAGTTCACAGATGATGGCTTTTTTAACAGTGATCTAGATGAGAACATGGGTTATGGCTGGAAGGCATGA 2424 0.4427 MTPSRVAGGLTQSSSNSGIFFQGDGHSLSVVHSHLSSSFGNSSNSMPGSGRSNLGPVSGDMNNAVLNSVANSGPSVGASSLVTDANSALSGGPHLQRSASINTDSHLRLPASPISFSSNNISISGSSVMDGSSVVQQSSHQDQSVQQLQQTQQPPQGASTSASLPALQTGPASFPMGARLPASFVQDPNNLTQLQKKPRLDIKQEDILQQQVMQQILQRQDPMQFQGHNPQLQPMPSMKLPYDSGVCARRLMQYLYHQRQRPNENSIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICHSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLDLPRECRFPSGVMMLEYVKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIADSGSDGISQQDLQTNSNMVLSVGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCRENKVGAIEGLKNYPRHSTVAKLQMQKMQEMEQLASVQGLPTDRNTLNKLMALHPGLNNQISNNHNIVNRGSLSGSAQAALALTNYQNLLLRQNSMNSNSNSLQRESLSSLNNSAQSPSTLQGSATALIPGSLQNLPVSGLSSAHLPQQQQQQLQQRPLGANNLRQQSHSQGSEGNQALQQQMFQRLLQEVSDSSGGVIQSQPLSGPNANGGMTKNALGFPGNAPPITRVSTNVSGSNGRAPSRSNSFKAASNSDSSAAGGNNGFNQRTSDMPQNLHLQEDVQDIAHEFTDDGFFNSDLDENMGYGWKA 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0816 807 Pfam LIM-domain binding protein 250 510 IPR029005 -
Sto13g0816 807 PANTHER LIM DOMAIN-BINDING PROTEIN 5 151 IPR029005 -
Sto13g0816 807 PANTHER LIM DOMAIN-BINDING PROTEIN 238 806 IPR029005 -
Sto13g0816 807 PANTHER LIM DOMAIN-BINDING PROTEIN 179 234 IPR029005 -
Sto13g0816 807 MobiDBLite consensus disorder prediction 724 770 - -
Sto13g0816 807 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 179 234 - -
Sto13g0816 807 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 238 806 - -
Sto13g0816 807 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 5 151 - -
Sto13g0816 807 MobiDBLite consensus disorder prediction 127 184 - -
Sto13g0816 807 MobiDBLite consensus disorder prediction 127 168 - -
Sto13g0816 807 MobiDBLite consensus disorder prediction 596 621 - -
Sto13g0816 807 MobiDBLite consensus disorder prediction 688 770 - -
Sto13g0816 807 MobiDBLite consensus disorder prediction 36 59 - -
Sto13g0816 807 MobiDBLite consensus disorder prediction 688 710 - -
Sto13g0816 807 MobiDBLite consensus disorder prediction 637 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0816 Sto-Chr13 8246027 8253492 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0816 236 516 C2H2 Transcription Factor Family AT1G43850 58.719 3.26e-111 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0816 - - pper:18787712 1110.52