Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0725 ATGTCGACAGTAAGCGATAGCACTGCTTCCACCGCATCTTCTCAGGGAAAAACCTATGGACTATTCAATTCGTCCAGTCAAGCCGCTACTATCAAGCTGGATAGAAGCAATTTTCTTCTCTGGGAAGCTACTGTTTATCACCTTATCAAAGGGAATCGACTCTCGTCTCATATTGATGGGACTGCCGCAGCTCCACCATCTAGGATTGTCGTTGATGGATTCCTAAACAGGAGGACACCTCCATCTGAGAATGAGTGCATTATACCATTTCTCATTTCTGAACATGACAAACACAAGGTTGGTGATGCTGAGGCTAACAAGGAAGAAGTAAGGGAGCTAAATTTGTCATCCACCCACTTAACGGCTAGTTCTGAACGTGCACAGTCATCTTCTGAAGACTCAGTATCAGGCTCAACTTCAAGTGAGTCACCTGCACATAATTCAGAGGCACGAGACACAACCTCAGCACCTAATTCGGGTGGATCAGCTACGCGTTACTCGGCCCAACTAGAAAATCAGAATCAGCTCTCAACTGGGCCTAGTTCATCAACTCAAGCCCAACAATACGGTATGGTTACGCGTTCTCGAGCTGTAAGTGACATCTCATTGTTCTATATACACAATACAAAGCTCACTGTATTTATATTagtgtatgtagatgatatcATAGTCACTGGGAATGACTCTAAGTTCTTAAAGGAGTTCATCAGGAAGCTGAATGCTGAGTTTGCTCTGAAGGACTTAGGTCCTCTATATTATTTCCTGGGAATAGAAGTTCACAGGGATAACACTAGCATCTACTTAAATCAGGGCAAATATGTGTTGGATGTTCTAAAACGTTTTGGGATGAATGATTTTGCCTCTGTCTCGACACAAATGGTCACTGGATGCAAATTCACAAACGAAGGTGGGGACAAAATGCTGGATCCGTCACTGTATCGTCAAGCCATTGGGTCGTTGCAATACTTGATCACTACCAGGCTAGACATTGCTTTTTCAGTAAATAAGTTGAGTCAGTTTTTGGCCCAACCTACCGAGGTATATATGGTTATGGCCTATATGGATTCCATAAAGGTCGTCACTTTATTGTTACTCATCATATGCTTAATGCCTGCAAGATCTTCGTCCAATGACGAAGACCACTACTCCTATCCTTTTACTCATCGCAAAGTATCATCCATTCAGAAATCCACAACCTCGTACGCTGTCATATTTGATGCTGGAAGTACTGGTAGTCGTGTGCATGTGTTCCAATTCAATCAGTCCTTAGATCTTCTTCCCATTGGTCAAGATCTTGAGTTTTTCGATCAGGTTAACCCAGGCTTAAGTGAATATGCTAAAAATCCAGGGAAAGCTGCAGAATCTCTTATTCCCCTTCTAGACGAAGCTGTGAGTGTTGTTCCCAAAAGGTTGCGCCACAAGACACCCGTGAGACTAGGGGCAACTGCAGGCTTGAGGGCCTTGGAAGGGAATGCCTCTGAATTGATATTGCAAGCGGTTAGGGATATGCTCAAGAAAAGAAGCACTCTGAAACTTGCGTCTGATGCAGTTGCTGTTATTGATGGAACTCATGAAGGCTCTTATCTATGGGTATGA 1596 0.4305 MSTVSDSTASTASSQGKTYGLFNSSSQAATIKLDRSNFLLWEATVYHLIKGNRLSSHIDGTAAAPPSRIVVDGFLNRRTPPSENECIIPFLISEHDKHKVGDAEANKEEVRELNLSSTHLTASSERAQSSSEDSVSGSTSSESPAHNSEARDTTSAPNSGGSATRYSAQLENQNQLSTGPSSSTQAQQYGMVTRSRAVSDISLFYIHNTKLTVFILVYVDDIIVTGNDSKFLKEFIRKLNAEFALKDLGPLYYFLGIEVHRDNTSIYLNQGKYVLDVLKRFGMNDFASVSTQMVTGCKFTNEGGDKMLDPSLYRQAIGSLQYLITTRLDIAFSVNKLSQFLAQPTEVYMVMAYMDSIKVVTLLLLIICLMPARSSSNDEDHYSYPFTHRKVSSIQKSTTSYAVIFDAGSTGSRVHVFQFNQSLDLLPIGQDLEFFDQVNPGLSEYAKNPGKAAESLIPLLDEAVSVVPKRLRHKTPVRLGATAGLRALEGNASELILQAVRDMLKKRSTLKLASDAVAVIDGTHEGSYLWV 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0725 531 Gene3D - 397 531 - -
Sto13g0725 531 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 209 293 IPR013103 -
Sto13g0725 531 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 357 531 IPR000407 GO:0016787
Sto13g0725 531 SUPERFAMILY DNA/RNA polymerases 212 344 IPR043502 -
Sto13g0725 531 PANTHER NOD FACTOR-BINDING LECTIN-NUCLEOTIDE PHOSPHOHYDROLASE 357 531 - -
Sto13g0725 531 MobiDBLite consensus disorder prediction 115 164 - -
Sto13g0725 531 MobiDBLite consensus disorder prediction 101 164 - -
Sto13g0725 531 Pfam GDA1/CD39 (nucleoside phosphatase) family 395 531 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0725 Sto-Chr13 7117289 7130805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0725 370 531 Calmodulin-binding Proteins AT3G04080 54.938 2.95e-48 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0725 K14641 - gmx:100781628 212.616