Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0719 ATGGATTCTAAGCCTACCCATTTTTCCAAGCCTCCATCTCTCAACGATGAAACAACCTCCGTCCTTGAGCCCAGCCCTTTTCGAAAACTCGTCATCGTTGCTTCCATTGCCACCGGAATCAACTTCGGATGGGCTCTTCAGCTCTCCCTGTTGACTCCATATGTCCAGCTCCTCGGTATCTCCCACACCATGGCCCCTTTCATATGGCTATGCGGCCCAATCTCTGGCCTCATTGTTCAGCCCATTGTTGGTTACTACAGTGACCGTTGCAAATCCCGATTCGGCAAACGACGTCCGTTCATTGCTGCTGGTGCTCTTTTTGTTGCCTTGGCTGTTTTCGTGATCAGTTATGCCGCTGATCTCGGCCACATGTTTGGCGACTCATTGCAAGAGAAATCACGGCCTCGTGCCATTGCTATCTTCATCATCGGATTTTGGATCCTGGATGTCTCCAACAACGTGCTACAAGGTCCTTGTCGTGCTCTCCTAGCAGACCTGTCCGCCGGTGACCAGAGGAAGACGAGCATGTCGAATGCGCTTTTCTCGTTCTTCATGGCCGTCGGAAACATTCTTGGTTATGCAGCTGGATCGTACGACGGCCTCCACAAGATCTTCCCATTTACAGACACGAAAGCATGTGACAAATACTGCGCAAACCTCAAGAGCTGCTTCTTCATCTCCATTGCGTTACTAGCATGTCTTGCCACAGTGGCGCTGATCTATGTGAAGGAGAATATTCCATCGTCATCGCTAGCAACGCCGGAGAATAAAGGAAGTGGCGAGAACTCGGGCGATGATTCAGTGGAAGAGGGAGATGGGGGATTACCGTGTTTTGGACAGATGTTCGGTGCATTCCGTGATCTTAAGAGGCCAATGTGGATTTTACTTCTGGTGACGTGTCTCAATTGGATTGGTTGGTTCCCTTTCGTGTTGTTCAACACTGATTGGATGGGGAAAGAGGTGTACGGAGGAACAGTTGGGGAAGGGAATGCGTACAATAATGGTGTGCACGCGGGAGCATTGGGTCTTATGATCCAATCAGTTGTGCTGGGAGTGGTGTCGTTGGGAGTAAATGTGTTGGCGCGCGGGGTTGGGAGTGTGAAGATGCTATGGGGAATCGTTAACTTCTTACTCGCGATCTGTTTGGCATTGACGGTGTTGATCACCAATATGGCAGAGCATACACGGCATTTCCCTCCGAACTCTACCGACCCTCTCCCACCTGTCACTAGCGTTAAGGCCAGCGCCTTAGCGCTTTTTGCTGTCCTTGGAATTCCTCTCGCGATTACTTACAGTGTCCCTTTTGCTCTCGCATCCATATTCTCCAACACTAGTGGGGCAGGCCAAGGATTATCTTTGGGAGTTCTCAATATCTCAATTTGCATACCACAGatgtttGTGTCTTTTGTAAGTGGACCATGGGACGCATTATTTGGTGGTGGTAACTTGCCGGCTTTTGTGGTGGGCGCCATAGCAGCTGCAGCCAGTGGCTTACTATCAATCTTCATGTTGCCGTCGCCACCACCAGACACGACCAAGGTGAAGACCATGGACGGAGGCTTTCATTAG 1569 0.5029 MDSKPTHFSKPPSLNDETTSVLEPSPFRKLVIVASIATGINFGWALQLSLLTPYVQLLGISHTMAPFIWLCGPISGLIVQPIVGYYSDRCKSRFGKRRPFIAAGALFVALAVFVISYAADLGHMFGDSLQEKSRPRAIAIFIIGFWILDVSNNVLQGPCRALLADLSAGDQRKTSMSNALFSFFMAVGNILGYAAGSYDGLHKIFPFTDTKACDKYCANLKSCFFISIALLACLATVALIYVKENIPSSSLATPENKGSGENSGDDSVEEGDGGLPCFGQMFGAFRDLKRPMWILLLVTCLNWIGWFPFVLFNTDWMGKEVYGGTVGEGNAYNNGVHAGALGLMIQSVVLGVVSLGVNVLARGVGSVKMLWGIVNFLLAICLALTVLITNMAEHTRHFPPNSTDPLPPVTSVKASALALFAVLGIPLAITYSVPFALASIFSNTSGAGQGLSLGVLNISICIPQMFVSFVSGPWDALFGGGNLPAFVVGAIAAAASGLLSIFMLPSPPPDTTKVKTMDGGFH 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0719 522 TIGRFAM GPH_sucrose: sucrose/H+ symporter 26 509 IPR005989 GO:0005887|GO:0008515|GO:0015770
Sto13g0719 522 SUPERFAMILY MFS general substrate transporter 28 509 IPR036259 -
Sto13g0719 522 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 13 514 - -
Sto13g0719 522 MobiDBLite consensus disorder prediction 1 20 - -
Sto13g0719 522 MobiDBLite consensus disorder prediction 250 270 - -
Sto13g0719 522 Pfam MFS/sugar transport protein 42 260 - -
Sto13g0719 522 PANTHER SUGAR TRANSPORTER 13 514 - -
Sto13g0719 522 Gene3D MFS general substrate transporter like domains 22 504 IPR036259 -
Sto13g0719 522 CDD MFS_SLC45_SUC 30 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0719 Sto-Chr13 6981004 6983358 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0719 23 522 Sucrose Transporter Gene Family AT1G71890 62.992 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0719 K15378 - gmx:547679 749.969