Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0691 ATGATGATGAACccattctcctcctcctcctcgtcCAAGGCAAAAAAGAAGCAAACGGCAACAACAAGCAGCACCGCAACGACACAAGAGCAAAAGCATGAAACGACATGGGGAGGGAGGTACCTTGGCGTTCGAAGGAGGCCATGGGGAAGATACGCCGCAGAGATCCGAGACCCTTCCACCAAAGAGCGGCATTGGCTCGGCACCTTCGACACCGCCGAAGAAGCCGCGTTGGCCTACGACCGTGCCGCTCGCTCCATGCGCGGCGCACGTGCCCGAACCAACTTCGTCTACTCCGACACTCCTCTCGGCTCTTCCGTCACCTCCATCATCTCTCCCGACGAACAAACCCGCCcgaaccaccaccaccaccacgactTGTCGTCTTTCCTCGACCCGAACTCTTTCACCCAACAATCGGATCCGACCCTTCACCTCACCGAATGCAACACCTTCTTAGGGATAACggatagtaataataataataataacacctGGACGACATCGCCGTCTTGTGTCGTTTACGCACAAACTCAAGCCATTCCATCCACGGACGACGACGCACATAAGCTATCCCATTTCCAACAACTGTATGAAGATAATAAGACCGAGCTGCCTCCATTACCGCCAGATATCACCAGCTCCATTGGATATAATGAGATGGGGCAAGGGTTTTACGGTAACGGATTCGAGTATTCGGAGCAGAGCGACGACGTATTGGCGGCGGCAACGAGCGGCGCATCGTTCTCGTATTTGGGATTTGAATCGGCGGATTACGTGCATAGCCCGATGTTCAGCACAATGCCACCGGTGACAGATAAGGTGCCGGAGGGCTTTGATTTGGGGGGAGTCCCAGTGGCGCCCAGAGGAACAAGGGACATTCATATCATACCCAAGTTCCCTGAGGAGTCCTATTGGCACCCTAAAGAACGAGGGACATTCATATCATTCATTGCACGCCCAACCTCCCTGAAAAACCCTAATGGTGACCTGGGAAGCGAAAGACATCCAAATTCCTTGCGGATCCCTAGTGGAACACTGAGGAACAAGGGTCATTCATCTTCTGCATTGTAG 1074 0.4981 MMMNPFSSSSSSKAKKKQTATTSSTATTQEQKHETTWGGRYLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSMRGARARTNFVYSDTPLGSSVTSIISPDEQTRPNHHHHHDLSSFLDPNSFTQQSDPTLHLTECNTFLGITDSNNNNNNTWTTSPSCVVYAQTQAIPSTDDDAHKLSHFQQLYEDNKTELPPLPPDITSSIGYNEMGQGFYGNGFEYSEQSDDVLAAATSGASFSYLGFESADYVHSPMFSTMPPVTDKVPEGFDLGGVPVAPRGTRDIHIIPKFPEESYWHPKERGTFISFIARPTSLKNPNGDLGSERHPNSLRIPSGTLRNKGHSSSAL 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0691 357 MobiDBLite consensus disorder prediction 1 35 - -
Sto13g0691 357 MobiDBLite consensus disorder prediction 325 357 - -
Sto13g0691 357 ProSiteProfiles AP2/ERF domain profile. 40 97 IPR001471 GO:0003700|GO:0006355
Sto13g0691 357 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP 6 282 - -
Sto13g0691 357 Pfam AP2 domain 41 89 IPR001471 GO:0003700|GO:0006355
Sto13g0691 357 PRINTS Ethylene responsive element binding protein signature 41 52 IPR001471 GO:0003700|GO:0006355
Sto13g0691 357 PRINTS Ethylene responsive element binding protein signature 63 79 IPR001471 GO:0003700|GO:0006355
Sto13g0691 357 SMART rav1_2 40 103 IPR001471 GO:0003700|GO:0006355
Sto13g0691 357 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 6 282 - -
Sto13g0691 357 SUPERFAMILY DNA-binding domain 40 98 IPR016177 GO:0003677
Sto13g0691 357 MobiDBLite consensus disorder prediction 1 39 - -
Sto13g0691 357 CDD AP2 40 96 IPR001471 GO:0003700|GO:0006355
Sto13g0691 357 Gene3D AP2/ERF domain 39 98 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0691 Sto-Chr13 6512138 6515584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0691 24 283 AP2-EREBP Transcription Factor Family AT5G13910 41.199 1.72e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto13g0691 AP2 3.6e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g0691 13 6512138 6515584 Sto13g0691 13 6512138 6515584 ECH