Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0650 ATGGCTGCAGCTATAAGTCAAAGAAGAATAACAAGCTCTGGTGTGACCATTGCAATAAGAATGGAAACACTAGGGAAACATGCGGGAAGATACATGGAAAGCCACCAAATTGGAAGCCAAGGAATCATTGTGAGACTTGAGAGTACAATGTTACTATTGAAGACTAAACCTCACAGACCGAGATGTCAATCCCAAGGAGCATTAGAGGCCATCCAGAAAATGATTTCCAACCAAACTAGGAATTTAATGAAAAGGCAAAGGCATCCAAGCCTTCAAGAAAGGCGTGACAGCTGCTGTAAAATGGCATCATGGTGTGGTAGGGGTGGATTTTCTGGGCTTGATGGATTGGGTGGGTTAGTGGGTGCGTTACTTGAAGCAGAATTGTGGGTTGTAAACTATTGGGCAGAAAAGGGAATAtctgggtttacagtttataagTTCCGTCTTAGGAGACTCGAGGGGCAGCCAACCTTAACAACTAATCAGGGCTTGTCCCTGTCTTGTTTGATGGGATATGGTTATCTCTATGGTTTTTTGTGCTTGGCTAGGAAGTCTTGCATGTTTGATATGCGAGGCTGGATaacttttatgtattttttagcCTGGGTTCATTTTACTAATGGACGTGTCCCTCAGTCTATTGCTGAAATACGAGGGCTTGTTTGTGAGGACATCACCAATGGTCAAGAAGATATGCCCATTCCTGCCACGAACTTGGTTGATGATCCCCCTATGGCACCAACAGGCAAGCAAGGCCCAACTTTAAAACTGAAAACATGGCTAGGTTTCACATATAGAAAATCAAATCTGGTttcaaaaaatgtaaaatttccCATAGCTGGCCCGGGATGCAAGTGCAAAGGCTTGTGTGTTGATCCTACATCTTGTGAATGTGCTTTACGAAATGGCTCTGATTTTCCCTATGTATCTCGTGACGGAGGCAGGTTAATTGAAGCCAAAGATGTTGTATTTGAGTGTGGGCCAAATTGCGGATGTGGTCCAGGTTGTGTTAATCGAACTTCTCAAAGAGGACTGAGATATCGTCTtgagGTTTTTCGTACTCCCAAGAAAGGATGGGCTGTTAGATCTTGGGATTTCATACCTTCAGGAGCGCCAGTCTGTGAATATACAGGATTTCTGAGGATGACGGAAGATATGGAGAATGCatttgagaacaattatatttttgagaTAGATTGTTTACAAACAATGAAGGGTATTGGTGGAAGAGAGAAGCGGTCACAAGATGAATCGTTAGCAATTAGTCTTATGGAAAACTATGAGGATGATATTTCTGAGAGTGTGCCGGAGTTTTGTATTGATGCAGGAACAACTGGAAATATTGCTCGATTTATAAACCATAGCTGTGAGCCAAATTTATTTGTTCAATGTGTTCTGAGCTCTCACCATGATTTAAAGCTTGCTCGAGTGATGTTATTTGCTGCAGACAACATACCACCTTTGCAGGAGCTAACTTATGACTACGGGTATGCCCTTGATAGTGTTTCGGATACTGAtggaaaagtaaagaaaatgaCATGTTATTGTGGAGCTGCCGACTGCAAGAAGAGACTATTCTAA 1581 0.4023 MAAAISQRRITSSGVTIAIRMETLGKHAGRYMESHQIGSQGIIVRLESTMLLLKTKPHRPRCQSQGALEAIQKMISNQTRNLMKRQRHPSLQERRDSCCKMASWCGRGGFSGLDGLGGLVGALLEAELWVVNYWAEKGISGFTVYKFRLRRLEGQPTLTTNQGLSLSCLMGYGYLYGFLCLARKSCMFDMRGWITFMYFLAWVHFTNGRVPQSIAEIRGLVCEDITNGQEDMPIPATNLVDDPPMAPTGKQGPTLKLKTWLGFTYRKSNLVSKNVKFPIAGPGCKCKGLCVDPTSCECALRNGSDFPYVSRDGGRLIEAKDVVFECGPNCGCGPGCVNRTSQRGLRYRLEVFRTPKKGWAVRSWDFIPSGAPVCEYTGFLRMTEDMENAFENNYIFEIDCLQTMKGIGGREKRSQDESLAISLMENYEDDISESVPEFCIDAGTTGNIARFINHSCEPNLFVQCVLSSHHDLKLARVMLFAADNIPPLQELTYDYGYALDSVSDTDGKVKKMTCYCGAADCKKRLF 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0650 526 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 201 525 - -
Sto13g0650 526 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 130 162 - -
Sto13g0650 526 SMART set_7 347 502 IPR001214 GO:0005515
Sto13g0650 526 Pfam Pre-SET motif 225 339 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Sto13g0650 526 SUPERFAMILY PUA domain-like 129 177 IPR015947 -
Sto13g0650 526 SMART preset_2 222 331 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Sto13g0650 526 Pfam SET domain 358 496 IPR001214 GO:0005515
Sto13g0650 526 Gene3D SET domain 215 526 IPR046341 -
Sto13g0650 526 ProSiteProfiles Post-SET domain profile. 510 526 IPR003616 -
Sto13g0650 526 ProSiteProfiles Pre-SET domain profile. 282 344 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Sto13g0650 526 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 201 525 - -
Sto13g0650 526 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 130 162 - -
Sto13g0650 526 ProSiteProfiles SET domain profile. 347 496 IPR001214 GO:0005515
Sto13g0650 526 SUPERFAMILY SET domain 218 497 IPR046341 -
Sto13g0650 526 Gene3D - 128 170 IPR036987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0650 Sto-Chr13 6071168 6083164 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0650 130 526 EF-hand Containing Proteins AT5G13960 55.639 2.24e-156 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sto13g0650 SET 7.6e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0650 K11420 - gmx:100796701 562.377