Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0594 ATGGCTCCTTCAGATAGCAACCGCCGACAATCTCTGATCCCGAACTTCCTCTACTCCTCATCTTCCTCCGAGAAAACTCTGTCGCTGCAGAAGATGCTCAACTCTAGCCCTGTCTCTGCCTCTTCTTCACCTTCGACACTGGAAGGGGGATCGTCGAGCAAGAGCTTTATGATTCCGGCTCCGAGTGAACCTGGCAAGGTCGAGATGTACTCACCGACTTACTATGCTGCTTGTACTGCTGGAGGAATCCTCAGTTGTGGACTGACACACATGGCGGTCACGCCTCTTGACTTAGTCAAATGTAATATGCAGATTGACCCTACGAAGTACAAGAGCATCTCATCTGGATTTGGAGTTTTGCTTAAGGAGCAGGGGTTCAGGGGCTTTTTCAGGGGCTGGGCGCCAACTTTGCTGGGTTACGGCGCTCAGGGAGCTTGCAAGTATGGATTCTACGAGTTTTTCAAAAAGTATTACTCAGATATTGCTGGCCCCGAGTATGCAACCAAGTACAAAACCTTGATATATCTTGCTGGTTCAGCTTCAGCAGAGGTGATTGCTGATGTTGCGCTTTGCCCCTTTGAGGCAGTGAAGGTTCGAGTTCAAACTCAGCCTGGTTTTGCTAGAGGTCTTTCCGATGGGCTCCCAAAATTTGTCAAATCTGAAGGAACTTTAGGGCTGTACAAAGGCATTGTTCCTCTATGGGGACGACAGATTCCATGTGCTAGAAGGCCGAACACCTCTTGCAGCATGAGGTGCGAGGACTTCATTGAGAAACCATATTCTAACTTAGCTCATCAAAATCAAGAACAAGGAAGCAAAAAGCTTATCTTAACAGCAAACATTGAAAAAATAGAGGCCACTTTAACTAGACAGAAGAAGACATTGATGGATAGAAAGTTAGTTTACAATTTGGAACTATATGCCTTGTTTCCTCTTATGTTTAAGAAAAAGTTAAGAGATACTATGATGAAGTTTGCTTCATTTGAGACCGTTGTGGAGATGATCTATAAATACGCCATCCCCAGACCAAAGAGCGAGTGCAGCAAGAATCTGCAACTTGGTGTGAGTTTTGCTGGTGGATACATAGCTGGTGTGTTGTGTGCGATCGTGTCTCATCCTGCTGACAACCTTGTCTCCTTCTTGAACAATGCCAAGGGGGCGACAGTCGGTGATGCTGTGAAGAAGCTTGGTTTGTGGGGTCTCTTTACCCGTGGTCTCCCTCTCCGTATTGTTATGATTGGAACTCTCACTGGAGCTCAATGGGGAATTTACGATGCATTTAAAGTCTCTGTGGGGCTGCCAACTACTGGCGGTGTTGCTCCTGCGGCCGCTCCTGCAGCTTCTCCCGGGCTTGCAAAGGTGTAG 1365 0.4718 MAPSDSNRRQSLIPNFLYSSSSSEKTLSLQKMLNSSPVSASSSPSTLEGGSSSKSFMIPAPSEPGKVEMYSPTYYAACTAGGILSCGLTHMAVTPLDLVKCNMQIDPTKYKSISSGFGVLLKEQGFRGFFRGWAPTLLGYGAQGACKYGFYEFFKKYYSDIAGPEYATKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLSDGLPKFVKSEGTLGLYKGIVPLWGRQIPCARRPNTSCSMRCEDFIEKPYSNLAHQNQEQGSKKLILTANIEKIEATLTRQKKTLMDRKLVYNLELYALFPLMFKKKLRDTMMKFASFETVVEMIYKYAIPRPKSECSKNLQLGVSFAGGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVSVGLPTTGGVAPAAAPAASPGLAKV 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0594 454 SUPERFAMILY Mitochondrial carrier 321 426 IPR023395 -
Sto13g0594 454 Gene3D Mitochondrial carrier domain 73 250 IPR023395 -
Sto13g0594 454 ProSiteProfiles Solute carrier (Solcar) repeat profile. 351 430 IPR018108 -
Sto13g0594 454 Pfam Mitochondrial carrier protein 173 240 IPR018108 -
Sto13g0594 454 Pfam Mitochondrial carrier protein 75 159 IPR018108 -
Sto13g0594 454 MobiDBLite consensus disorder prediction 28 56 - -
Sto13g0594 454 SUPERFAMILY Mitochondrial carrier 74 240 IPR023395 -
Sto13g0594 454 Gene3D Mitochondrial carrier domain 298 453 IPR023395 -
Sto13g0594 454 ProSiteProfiles Solute carrier (Solcar) repeat profile. 170 259 IPR018108 -
Sto13g0594 454 ProSiteProfiles Solute carrier (Solcar) repeat profile. 73 157 IPR018108 -
Sto13g0594 454 PANTHER PHOSPHATE CARRIER PROTEIN 310 444 - -
Sto13g0594 454 PANTHER PHOSPHATE CARRIER PROTEIN 1 275 - -
Sto13g0594 454 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 1 275 IPR044677 GO:0005315|GO:1990547
Sto13g0594 454 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 310 444 IPR044677 GO:0005315|GO:1990547
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0594 Sto-Chr13 5462354 5466065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0594 185 448 Chloroplast and Mitochondria Gene Families AT5G14040 51.399 2.74e-81 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0594 K15102 - rcu:8273124 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g0594 13 5462354 5466065 Sto13g0594 13 5462354 5466065 ECH
Sto8g1636 8 10516460 10519990 Sto13g0594 13 5462354 5466065 ECH